DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc27 and nuc2

DIOPT Version :10

Sequence 1:NP_648093.2 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_594604.2 Gene:nuc2 / 2542438 PomBaseID:SPAC17C9.01C Length:665 Species:Schizosaccharomyces pombe


Alignment Length:871 Identity:218/871 - (25%)
Similarity:360/871 - (41%) Gaps:241/871 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLLKEKARRSPQCR 71
            ::..||:|::..::.:::|.||||.:..:|:|:::|||.|:|.:...:..|.||.......| |.
pombe     5 LKCLIWYCIDNQNYDNSIFYSERLHAIEDSNESLYLLAYSHFLNLDYNIVYDLLDRVISHVP-CT 68

  Fly    72 FLQAKCAYELKKYAEAESAL---------ISTGFADAKNCDELQRDFGDLACFAYQLMAQICMRT 127
            :|.|:.:..|.:|.:..||:         |.....|:.:    .|...|.:|. ..::..:..:.
pombe    69 YLFARTSLILGRYKQGISAVEACRSNWRSIQPNINDSIS----SRGHPDASCM-LDVLGTMYKKA 128

  Fly   128 ERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTDVFNTCQG---SSVNANAMV 189
            ...|.|......|:.:||:.:.||.:|..:|...||..:|.|  .......:|   |..||.|.|
pombe   129 GFLKKATDCFVEAVSINPYNFSAFQNLTAIGVPLDANNVFVI--PPYLTAMKGFEKSQTNATASV 191

  Fly   190 LFGAEQQGQQHQERQSLITNLSNVSNYILTTPVDQQQQQINQNQNQHHNSNMVTPINNNNNNNNL 254
               .|....:..:..|..:|..:||..|.                                |:..
pombe   192 ---PEPSFLKKSKESSSSSNKFSVSESIA--------------------------------NSYS 221

  Fly   255 NSSISMLRGGLVQNSSMLAMLEDTPMGAPQDPAGQYQQNQQLYDMSSGTPFRKQFKYLSAISPPT 319
            |||||                                            .|.|.|..:.|     
pombe   222 NSSIS--------------------------------------------AFTKWFDRVDA----- 237

  Fly   320 PSFGIMPLTSPCTGNDGSFIGNHTPVMNISYSPMPQMLVEVNQEPKMMGKKLKTHVGGLINRKEG 384
                                           |.:|....|.:|..|:.            ::.:.
pombe   238 -------------------------------SELPGSEKERHQSLKLQ------------SQSQT 259

  Fly   385 SLNKPAVFTQAGNITPRTPNNNNVGNNGNMNVPPNPNAAVRRSSRLFSNSYSVKENNKSPNIANK 449
            |.|..|                                        |:::.....||:..::.:.
pombe   260 SKNLLA----------------------------------------FNDAQKADSNNRDTSLKSH 284

  Fly   450 FVQPRSPPRKAKSRMTKICLNNELIEDKSHHLSEKRKEKVETITSSGANNNSGGRSAAEEAKVLL 514
            ||:||:...:..:|:|             :.|.|.|..|         ...|..:|..||.    
pombe   285 FVEPRTQALRPGARLT-------------YKLREARSSK---------RGESTPQSFREED---- 323

  Fly   515 NNSLNNAQTMAHQLMGLKKQSADGLMALLRGLAEAYQLLSNFQCKAAIKQLETTIPKHHLNSSWV 579
                ||                  ||.||:...:...||:.::.:.|:...: ::|....|:.:|
pombe   324 ----NN------------------LMELLKLFGKGVYLLAQYKLREALNCFQ-SLPIEQQNTPFV 365

  Fly   580 QSLIGLARYEMREYEAAVAIFETIHKTEPCRLDYMEIYSSSLWHLQREVELSALAQDLINQDKTS 644
            .:.:|:..:|:.:||.:..:|:.:....|.|:..||::|::|||||:.|.||.||.:.:..:..|
pombe   366 LAKLGITYFELVDYEKSEEVFQKLRDLSPSRVKDMEVFSTALWHLQKSVPLSYLAHETLETNPYS 430

  Fly   645 PVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTLLGHELVLTEEFDKAMDYFRAAVVRD 709
            |.:||:..||||||:||..|:|...||:|:||.|.|:|||.|||....||::|:...||.|:..:
pombe   431 PESWCILANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVN 495

  Fly   710 PRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVILVHIGAMQFYMKKKDL--SLQTLNT 772
            .||||||||:|.:|.|..:.:.|:.|:.:|.:|||.|||::..||  ..|.:.||.  :|...:.
pombe   496 VRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIG--MIYERCKDYKKALDFYDR 558

  Fly   773 AATLDPKNPLTRFHRGSIYFSLGKYQEALRELEELKEVVPKESVVFYLIGKIHKTLGNMDLALMH 837
            |..||.|:.|.||.:..:...|..:.:||.|||:||.:.|.|:.|.:|:|||.|.:...:|||.|
pombe   559 ACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPDEANVHFLLGKIFKQMRKKNLALKH 623

  Fly   838 FSWATDLDPKGANNQIKDAFDSMAHP 863
            |:.|.:||.| |.:.||::.:::..|
pombe   624 FTIAWNLDGK-ATHIIKESIENLDIP 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_648093.2 ANAPC3 16..94 CDD:463743 24/86 (28%)
BepA 38..168 CDD:443813 33/138 (24%)
TPR repeat 68..104 CDD:276809 10/44 (23%)
TPR repeat 109..143 CDD:276809 5/33 (15%)
Spy 540..>753 CDD:443119 82/212 (39%)
TPR repeat 582..605 CDD:276809 5/22 (23%)
TPR 652..>809 CDD:440225 69/158 (44%)
TPR repeat 678..708 CDD:276809 14/29 (48%)
TPR repeat 713..741 CDD:276809 12/27 (44%)
TPR repeat 747..773 CDD:276809 8/27 (30%)
TPR 776..>850 CDD:440225 31/73 (42%)
TPR repeat 781..809 CDD:276809 10/27 (37%)
TPR repeat 815..838 CDD:276809 9/22 (41%)
nuc2NP_594604.2 ANAPC3 14..91 CDD:463743 23/77 (30%)
Spy 291..>546 CDD:443119 98/305 (32%)
TPR repeat 332..357 CDD:276809 3/25 (12%)
TPR repeat 363..425 CDD:276809 21/61 (34%)
TPR 424..>601 CDD:440225 75/178 (42%)
TPR repeat 431..459 CDD:276809 15/27 (56%)
TPR repeat 466..493 CDD:276809 13/26 (50%)
TPR repeat 498..528 CDD:276809 13/29 (45%)
TPR repeat 533..561 CDD:276809 9/29 (31%)
TPR repeat 567..592 CDD:276809 8/24 (33%)
TPR repeat 601..627 CDD:276809 11/25 (44%)

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