DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc27 and mat-3

DIOPT Version :10

Sequence 1:NP_648093.2 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_497203.1 Gene:mat-3 / 175205 WormBaseID:WBGene00003134 Length:673 Species:Caenorhabditis elegans


Alignment Length:766 Identity:157/766 - (20%)
Similarity:261/766 - (34%) Gaps:236/766 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 VQNS--SMLAMLEDTP--MGAPQDPAGQYQQNQ-QLYDMS---------------SGTPFRKQFK 310
            ||||  |.||:::...  .|| ..|||||:.:: ..:|:|               :|..|.::.:
 Worm     9 VQNSTASRLALIQQAAARSGA-LPPAGQYRGSKLSPFDVSQMSGVSISMVERAKINGPEFVEELE 72

  Fly   311 YL----------------SAISPPTPSFGIMPLTSPCTGNDGSFIGNHT------PVMNISYSPM 353
            :|                :.|....|.....|.|..........:.::|      |..|..|:| 
 Worm    73 WLRQQTTSRCFLDAEMWTNEILAHLPDKWCAPNTLNLYNQVSELVLDNTRSPMASPASNSLYAP- 136

  Fly   354 PQMLVEVNQEPKMMGKKLKTHVGGLINRKEGSLNKPAVFTQAGNITPRTPNNNNVGNNGNMNVPP 418
                 ..:|.|.:...........||..||        |.:|.....:|.|.|.:.:..:...  
 Worm   137 -----GEDQMPTVKRNHTSRFAQSLIKNKE--------FRRAAFFLEKTMNGNKLDHFLHFRC-- 186

  Fly   419 NPNAAVRRSSRLFSNSYSVKENNKSPNIANK--FVQPRSPPRKAKSRMTKICLNNELIEDKSHHL 481
                       ||...|.....|.:..|..|  |.:.|||......||          |||    
 Worm   187 -----------LFLAYYQEHLENDAEGIERKTSFAEERSPFSLLYQRM----------EDK---- 226

  Fly   482 SEKRKEKVETITSSGANNNSGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLKKQSADGLMALLRGL 546
              |.:|                                |.......||||.:....     |:.|
 Worm   227 --KLRE--------------------------------NEDVWFEYLMGLLEVELG-----LKDL 252

  Fly   547 AE---------------AYQLLS----------NFQCKAAIKQL-------ETTIPKHHLNSSWV 579
            ||               |::.||          .|...|.:|.|       ...:.:.|.:|..:
 Worm   253 AEKSFRNVVIREPRIWPAWEALSRLIADIEDADKFVTSAEVKSLWMGDWFMTLVLQRFHQHSMAI 317

  Fly   580 Q--------SLIGL------------ARYEMREYEAAVAIFETIHKTEPCRLDYMEIYSSSLWHL 624
            |        .:.||            ||:   :::.|::.||.:.|.:|.||..:.:.|.||:..
 Worm   318 QKAEQLVTRGMTGLPMIITKIAACSNARH---DHDQAISNFEDVRKADPYRLGDLHLLSDSLYIR 379

  Fly   625 QREVELSALAQDLINQDKTSPVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTLLGHEL 689
            ..:.:||.||.::....|....|.|:..|..:::::.|.|||||:||::::|.....:.|:|||.
 Worm   380 NDQKKLSTLAIEVYKVHKFRWETCCIVANYHAIRRDSEHAIKFFQRALRLNPGLAALWVLIGHEF 444

  Fly   690 VLTEEFDKAMDYFRAAVVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVILVHIG 754
            :..:....|...:|.|:..||..:..|||:|.:|...:....|..:|.:|.|..|.:|.:||.:|
 Worm   445 MEMKNNAAACVSYRRAIEIDPADHRGWYGLGQMYDIMKMPAYALFYYQEAQKCKPHDSRLLVALG 509

  Fly   755 AMQFYMKKKDLSLQTLNTAATLDPKNPLTRFH-----RGSIYFSLGKYQEALRELEELKEVVPKE 814
              ..|.|...:.          |.:...|..:     .|:..:||.|..|...:..:..:.....
 Worm   510 --DIYSKLNRIE----------DAEKCFTGAYLFGDVEGNALWSLAKLHERYSDDNKAAQAFEVF 562

  Fly   815 SVVFYLIGKI-HKTLGNMDLALMHFSWATDLDPKGANNQIKDAFDSMAHPSCC------------ 866
            .||:.|:... .|.:..:.....||....|.| |.:....|    .:|..:.|            
 Worm   563 LVVYELVTSAEEKIIYAIAFLANHFFKIEDFD-KASEYATK----CLAFETLCQEGNRLFREIAK 622

  Fly   867 ---------------PANTT------ALDVDLEPTSERSDDSTQAQQDGSY 896
                           |:|.:      |:|.:..|.....::.::.:.|.|:
 Worm   623 IQARESRLPVEEAPGPSNASAAGGQEAMDTEEAPQEGGEEEMSEGEDDFSF 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_648093.2 ANAPC3 16..94 CDD:463743
BepA 38..168 CDD:443813
TPR repeat 68..104 CDD:276809
TPR repeat 109..143 CDD:276809
Spy 540..>753 CDD:443119 67/264 (25%)
TPR repeat 582..605 CDD:276809 7/34 (21%)
TPR 652..>809 CDD:440225 42/161 (26%)
TPR repeat 678..708 CDD:276809 7/29 (24%)
TPR repeat 713..741 CDD:276809 8/27 (30%)
TPR repeat 747..773 CDD:276809 6/25 (24%)
TPR 776..>850 CDD:440225 16/79 (20%)
TPR repeat 781..809 CDD:276809 6/32 (19%)
TPR repeat 815..838 CDD:276809 4/23 (17%)
mat-3NP_497203.1 PEP_TPR_lipo <248..558 CDD:274350 77/329 (23%)
TPR repeat 401..428 CDD:276809 11/26 (42%)
TPR 407..>560 CDD:440225 42/164 (26%)
TPR repeat 434..462 CDD:276809 7/27 (26%)
TPR repeat 467..497 CDD:276809 8/29 (28%)
TPR repeat 502..529 CDD:276809 8/38 (21%)
TPR repeat 577..605 CDD:276809 6/32 (19%)
Blue background indicates that the domain is not in the aligned region.

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