Protein Alignment Neos and NUP42

DIOPT Version :9

• Sequence 1: NP_001261502.1
• Gene: Neos / 38795
• FlyBaseID: FBgn0024542
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: NP_010478.3
• Gene: NUP42 / 851774
• SGDID: S000002600
• Length: 430
• Species: Saccharomyces cerevisiae
• Alignment Length: 305
• Identity: 57/305 - (18%)
• Similarity: 92/305 - (30%)
• Gaps: 108/305 - (35%)

  Fly    35 LVSICQPYGKVLGSM--------------------------------------VQKNYGFVQFET 61
            :.:...|:||..|||                                      ....:|.:|...
Yeast   127 MAATSNPFGKSPGSMGSAFGQPAFGANKTAIPSSSVSNSNNSAFGAASNTPLTTTSPFGSLQQNA 191

  Fly    62 EELANKAASALHKSTF------KQNMLTVRNASIKSKAA----NAIAKRNSNQGGQVTVQGGLVM 116
            .:.|:..:||..|.||      :....|::|.|..|...    ......::|:.....:|.|
Yeast   192 SQNASSTSSAFGKPTFGAATNTQSPFGTIQNTSTSSGTGVSPFGTFGTNSNNKSPFSNLQSG--- 253

  Fly   117 SAAAAAAGQPLINDCEIIVQNRENTKYAEY-------------------IEERLKNSSLRVDVLF 162
                |.||............|..|...:.:                   .....||::......|
Yeast   254 ----AGAGSSPFGTTTSKANNNNNVGSSAFGTTNNQSPFSGGSGGTFGSASNLNKNTNGNFQSSF 314

  Fly   163 PNEDVLLGKVLANISSRGCLYAVLVTPQHEEHNSITVNILYGVPAEHRNMPLEDA-ITLIS---- 222
            .|:....|                :|||::.:.....|..:|     :.||..|. |:|.|
Yeast   315 GNKGFSFG----------------ITPQNDANKVSQSNPSFG-----QTMPNTDPNISLKSNGNA 358

  Fly   223 TDFRL-KKQRDAVVLPPSTSIHKGQRRHPQ----EMQGLLERLAD 262
            |.|.. ::|.:|..:..:|:  .|:.|..|    |..|:|| |||
Yeast   359 TSFGFGQQQMNATNVNANTA--TGKIRFVQGLSSEKDGILE-LAD 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Neos	NP_001261502.1	U2AF_lg	<19..149	CDD:273727	26/180 (14%)
		RRM_SF	20..78	CDD:388407	14/86 (16%)
NUP42	NP_010478.3	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0845
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900