Sequence 1: | NP_001261502.1 | Gene: | Neos / 38795 | FlyBaseID: | FBgn0024542 | Length: | 371 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
Alignment Length: | 411 | Identity: | 70/411 - (17%) |
---|---|---|---|
Similarity: | 131/411 - (31%) | Gaps: | 123/411 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SDPGSAGYNITKDPALAKSRIFLGNLPVCTREEL---VSICQPYGKVLGSMVQKNYGFVQFETEE 63
Fly 64 LANKAASALHKSTFKQNMLTV-RNASIKSKAAN--AIAKRNSNQGGQVTVQGGLVMSAAAAAAGQ 125
Fly 126 P--------------------------LINDCEIIVQN----RENTKYAE-YIEERLKNSSLRVD 159
Fly 160 --VLFPNEDVLLGKVLANISSRGCLYAVLVTPQHEEHNSITVNILYGVPAEHRNMPL-----EDA 217
Fly 218 ITLISTDFRLKKQRDAVVLPPSTSIHKGQRRHPQEMQGLLERLADNH--------PLTAS---QY 271
Fly 272 EVILKYLEGEREEQLKREVGEANALAKLKAPDPEIELQKKILSIMNKPAVTDVTSELMYPTFEAV 336
Fly 337 KEDRRLMELLA---DDRVLAA 354 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Neos | NP_001261502.1 | U2AF_lg | <19..149 | CDD:273727 | 28/166 (17%) |
RRM_SF | 20..78 | CDD:388407 | 7/60 (12%) | ||
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | |
Nucleoporin2 | 888..1027 | CDD:309287 | 30/182 (16%) | ||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | |||
Nucleoporin_FG | 50..164 | CDD:316182 | |||
Nucleoporin_FG | 254..318 | CDD:316182 | |||
NupH_GANP | 316..>522 | CDD:318883 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |