DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neos and XB5885308

DIOPT Version :10

Sequence 1:NP_523955.1 Gene:Neos / 38795 FlyBaseID:FBgn0024542 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001120439.1 Gene:XB5885308 / 100145527 XenbaseID:XB-GENE-5885309 Length:476 Species:Xenopus tropicalis


Alignment Length:243 Identity:51/243 - (20%)
Similarity:92/243 - (37%) Gaps:80/243 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 NDCEIIVQNRENTKYAEYIEERLKNSSLRVDVLFPNEDVLLGKVLANISSRGCLYAVLVTPQHEE 193
            :||.|:..::|..:||..|..||::..|.|::::...:..|.:.|..:.:.|..:.:||...:..
 Frog   114 SDCVIVAISKEQMEYATAIGHRLQDHGLVVEMIYLTSESGLTRALQEVKNDGSPFCILVEQTNVA 178

  Fly   194 HNSITVNILYGVPAEHRNMPLEDAITLISTDFRLKKQRDAVVLPPSTSIHKGQRRHPQEMQGLLE 258
            .:..|..||:.....|||||:|||:.|:...|                   |:            
 Frog   179 LSPCTAIILHDSIKIHRNMPMEDALALVVKAF-------------------GK------------ 212

  Fly   259 RLADNHPLTASQYEVILKYLEGEREEQLKREVGEANALAKLKAPDPEIELQKKILSIMNKPAVTD 323
                               :.||||:|.:.|:..       ||.|                ...|
 Frog   213 -------------------IFGEREQQERNEISH-------KAAD----------------LADD 235

  Fly   324 VTSELMYPTFEAVKEDRRLMELLADDRVLAALESVYNSDLRQILAEYL 371
            .....:|.::....:.|.|:.||:|.:.|      |:.:| |.:::|:
 Frog   236 YLERELYESYSVPLDIRHLLFLLSDGKYL------YSEEL-QAISDYV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NeosNP_523955.1 U2AF_lg <19..149 CDD:273727 7/19 (37%)
RRM_SF 20..78 CDD:473069
XB5885308NP_001120439.1 PHA03247 <327..475 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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