DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18 and exoc3

DIOPT Version :9

Sequence 1:NP_001261501.1 Gene:RpL18 / 38794 FlyBaseID:FBgn0035753 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001005685.1 Gene:exoc3 / 448187 XenbaseID:XB-GENE-972389 Length:747 Species:Xenopus tropicalis


Alignment Length:24 Identity:8/24 - (33%)
Similarity:15/24 - (62%) Gaps:2/24 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLVKLYRFLQRRTNKKFNRIILKR 50
            |||.:.|.::|  .:|.:|.::.|
 Frog   208 LLVSVVRIIER--EEKVDRRMMDR 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18NP_001261501.1 Ribosomal_L18e 11..188 CDD:299869 8/24 (33%)
exoc3NP_001005685.1 Sec6 177..732 CDD:283659 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165162960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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