DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18 and Rpl18

DIOPT Version :9

Sequence 1:NP_001261501.1 Gene:RpL18 / 38794 FlyBaseID:FBgn0035753 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_033103.2 Gene:Rpl18 / 19899 MGIID:98003 Length:188 Species:Mus musculus


Alignment Length:187 Identity:132/187 - (70%)
Similarity:149/187 - (79%) Gaps:0/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQR 65
            ||:||.|..||||||.||||||:||||||||||||.||||..||:::|||||||:.|||||||.|
Mouse     1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSR 65

  Fly    66 IARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRS 130
            :.|..|...:...|.|||||||||.|:|.||||.||||.|:..||.|||||||::||||||||.|
Mouse    66 MIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALES 130

  Fly   131 PTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGRRSSCGYK 187
            |.|:.|:||.|.|..|...:|||||||.|||||:|||||||||||||||||:|.|||
Mouse   131 PKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18NP_001261501.1 Ribosomal_L18e 11..188 CDD:299869 126/177 (71%)
Rpl18NP_033103.2 Ribosomal_L18 2..176 CDD:407269 120/173 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..188 33/38 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833565
Domainoid 1 1.000 267 1.000 Domainoid score I1862
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H756
Inparanoid 1 1.050 269 1.000 Inparanoid score I3010
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54131
OrthoDB 1 1.010 - - D1303996at2759
OrthoFinder 1 1.000 - - FOG0002775
OrthoInspector 1 1.000 - - oto94431
orthoMCL 1 0.900 - - OOG6_100803
Panther 1 1.100 - - LDO PTHR10934
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1112
SonicParanoid 1 1.000 - - X1864
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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