DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18 and RL18_ANOGA

DIOPT Version :9

Sequence 1:NP_001261501.1 Gene:RpL18 / 38794 FlyBaseID:FBgn0035753 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_001687888.1 Gene:RL18_ANOGA / 1269649 VectorBaseID:AGAP007580 Length:189 Species:Anopheles gambiae


Alignment Length:188 Identity:133/188 - (70%)
Similarity:159/188 - (84%) Gaps:1/188 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQR 65
            ||||||||:|||||||.|||.||||.|||||||||.|||.||||:|:::|||||:.|.||:||.|
Mosquito     1 MGIDINHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNR 65

  Fly    66 IARFFKAANQPESTI-VVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALR 129
            :|...|...:.|.:: ||:||||:|.|::.||||.||||.||..||:||||.||::.|||||||.
Mosquito    66 VAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALL 130

  Fly   130 SPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGRRSSCGYK 187
            ||||:||:|:||:||||...||||:|||||||:|||||:|||||||:|||||||||||
Mosquito   131 SPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKARGRRSSCGYK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18NP_001261501.1 Ribosomal_L18e 11..188 CDD:299869 124/178 (70%)
RL18_ANOGAXP_001687888.1 Ribosomal_L18e 1..188 CDD:299869 131/186 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 275 1.000 Domainoid score I4256
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H756
Inparanoid 1 1.050 277 1.000 Inparanoid score I5335
OMA 1 1.010 - - QHG54131
OrthoDB 1 1.010 - - D1303996at2759
OrthoFinder 1 1.000 - - FOG0002775
OrthoInspector 1 1.000 - - oto109933
Panther 1 1.100 - - LDO PTHR10934
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1864
TreeFam 00.000 Not matched by this tool.
1111.080

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