Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291422.1 | Gene: | ush2a / 568982 | ZFINID: | ZDB-GENE-060503-794 | Length: | 5243 | Species: | Danio rerio |
Alignment Length: | 2181 | Identity: | 462/2181 - (21%) |
---|---|---|---|
Similarity: | 710/2181 - (32%) | Gaps: | 684/2181 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LNLDNTCSEPFEAHLR-------------GPGFVMEPPGRVEFSNSSGGWLDCSAS-GSPQ---- 60
Fly 61 PTVDWVHADGSAVTEIHGVRRVLRNGTLV-------------------------LMPFAAAAYHQ 100
Fly 101 DVHNTIYRCIASNSVGRIVSRDVQVRAVVAQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVV 165
Fly 166 SWVHEPAIYIYPSLQGDGKFHLLPTGEL--------LIHNLQESDESQSF----RC--------- 209
Fly 210 ----RSMHRLTRQVVVSSPTRLRINSHRGIISPSVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYS 270
Fly 271 WFTHNGAGPLPVLSGPRVRLLGPILAIEAV-------TGED--------SGVYK-CTAGNV---- 315
Fly 316 -----GGEASAELRLTVATPIQVEI----SPNVLSVHMGGTAEFRC-----LVTSNGSPVGMQNI 366
Fly 367 LWYKDGRQLPSSGRVEDTLVVPRVSRENR-GMYQC----VVRRPE----GDTFQATAELQLGDAP 422
Fly 423 PVLLYSFIEQTLQPGPAVSLKCSAAG-------NPTPQI-SWTLDG-FP--LPSNGRFMIGQYIT 476
Fly 477 VHGD--------VISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPY-----IRLIPK 528
Fly 529 VTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWAR 593
Fly 594 NKQGHSARRSGEVTVIVPPKLSPFQTNILQLN------------------MGDRASLTCSVVK-- 638
Fly 639 GDLPLTINWRKDGRPIDPTQ-------------------HMSVKQVDQYNSILVIENLGSDHTGN 684
Fly 685 YSCVVRN-SAAEVENSQALLVNVPPRWIVEPVDANV-ERNRHIMLHCQAQGVPTPSIVWK---KA 744
Fly 745 TGSKSGEYEEVR--ERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIGTGIGK--VIQLKVNS- 804
Fly 805 ----SPYFSST--SRSVMVKKGDTALLQCA----------VSGDKPINIVWMRSG-------KNT 846
Fly 847 LNPSTNYKISVKQEATPD--GVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPLPP 909
Fly 910 SVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADHSLPPALFVDQWQQIEVKDPPHFNAMI 974
Fly 975 ENLKPATRYAFRVIAEGSAGRSAPSQELIVRT---EPQRPAGPPLSLSARPLSSTELLISWVAPL 1036
Fly 1037 PELRHGDIQGYNVGYKLSSSGNTAYNFTSVSGDGDGGN-GELLLSGLAKFARYTVVVQAFNQVGP 1100
Fly 1101 GPLSEP-TAAQTMEDVPSRPPEDVRCAALS------SQSLQVSWQPPPIYHTNGLLQGYKLIFEP 1158
Fly 1159 IIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPA 1223
Fly 1224 DIKVVSSSSQSLYISWLPPNEPNGVITKYSLY-TRVVNGREELNNEKRSLPSQQAY--------- 1278
Fly 1279 --YEAKGLHPHMEYQF--------------WVTASTRVG-------------EGKSSRV------ 1308
Fly 1309 ----SSQITTNRIPARII----SFGGPVVR---------PWRSTVTLPCTAVGKPKREWFKSDVA 1356
Fly 1357 LRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQV-------DNG--------IGTD--------- 1397
Fly 1398 --------RLTHTLIV-------------------QVPPT---APVLYVTSATSSSILMHWKCGF 1432
Fly 1433 TGNAPITGYTLFYRRANGN-----TDEMQLSRHASSHELKGLMCGSTYQIHLSAQNKVG--TSPT 1490
Fly 1491 STILHVRTQGQSPGHPASTALLAPNSTSLLVRLHSWP----DNGCPLLYFVLQYRAVTDDPDAE- 1550
Fly 1551 ----WVLVS-NALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQAEFNFVTLTKD---GDPPPPE 1607
Fly 1608 IMHRGRSGQTTVIFANINLLIPTIAAVSGMFCTIIMIIVCYRHMLKNAPPLAEQSQIQKESLENR 1672
Fly 1673 ANSEAAQRERYYATIHKVSMQ-NNDKI-PETSEDISPYATFQLSEAGGNMSQPHHG--GPANTLL 1733
Fly 1734 HSFMYHERALAEGCSSPPPAASKNRRRHSRKTEPESEES-------ESDQDQLTSSRTESSNQHE 1791
Fly 1792 GKIKHSIIYHGAQSST------SSDLSPMSEQKSLP 1821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam2 | NP_001261500.1 | Ig | 51..127 | CDD:299845 | 20/105 (19%) |
Ig | 138..>203 | CDD:299845 | 10/72 (14%) | ||
I-set | 238..327 | CDD:254352 | 21/113 (19%) | ||
Ig | 247..327 | CDD:299845 | 21/104 (20%) | ||
I-set | 332..418 | CDD:254352 | 20/103 (19%) | ||
IGc2 | 344..407 | CDD:197706 | 16/76 (21%) | ||
IG_like | 432..517 | CDD:214653 | 19/103 (18%) | ||
IGc2 | 436..507 | CDD:197706 | 18/89 (20%) | ||
I-set | 521..610 | CDD:254352 | 16/93 (17%) | ||
IGc2 | 533..597 | CDD:197706 | 12/63 (19%) | ||
Ig | 630..699 | CDD:143165 | 20/90 (22%) | ||
IG_like | 714..802 | CDD:214653 | 26/95 (27%) | ||
Ig | 725..802 | CDD:299845 | 22/83 (27%) | ||
Ig | 823..894 | CDD:143165 | 16/89 (18%) | ||
FN3 | 906..1006 | CDD:238020 | 25/99 (25%) | ||
FN3 | 1013..1111 | CDD:238020 | 33/99 (33%) | ||
FN3 | 1119..1209 | CDD:238020 | 20/95 (21%) | ||
FN3 | 1219..1313 | CDD:238020 | 32/142 (23%) | ||
Ig | 1336..1402 | CDD:143165 | 14/97 (14%) | ||
FN3 | 1409..1498 | CDD:238020 | 28/98 (29%) | ||
FN3 | 1515..1588 | CDD:238020 | 21/82 (26%) | ||
ush2a | XP_009291422.1 | Laminin_G_3 | 160..297 | CDD:290121 | |
Laminin_N | 307..528 | CDD:295486 | |||
EGF_Lam | 529..577 | CDD:238012 | |||
EGF_Lam | 586..638 | CDD:238012 | |||
Laminin_EGF | 653..703 | CDD:278482 | |||
Laminin_EGF | 706..756 | CDD:278482 | |||
EGF_Lam | 759..797 | CDD:214543 | |||
Laminin_EGF | 808..857 | CDD:278482 | |||
EGF_Lam | 859..912 | CDD:238012 | |||
EGF_Lam | 913..963 | CDD:238012 | |||
EGF_Lam | 965..1014 | CDD:238012 | |||
EGF_Lam | 1015..1064 | CDD:238012 | |||
FN3 | 1177..1253 | CDD:238020 | |||
FN3 | 1264..1375 | CDD:238020 | |||
FN3 | 1386..1469 | CDD:214495 | |||
LamG | 1537..1699 | CDD:238058 | |||
LamG | 1737..1890 | CDD:238058 | |||
FN3 | 1981..2071 | CDD:238020 | |||
FN3 | 2163..2253 | CDD:238020 | |||
FN3 | 2258..2341 | CDD:238020 | |||
FN3 | 2352..2443 | CDD:238020 | |||
FN3 | 2447..2544 | CDD:238020 | |||
FN3 | 2547..2633 | CDD:238020 | |||
FN3 | 2635..2733 | CDD:238020 | |||
FN3 | 2743..2807 | CDD:238020 | |||
FN3 | 2830..2932 | CDD:238020 | |||
fn3 | 2939..3014 | CDD:278470 | 6/28 (21%) | ||
FN3 | 3032..>3099 | CDD:238020 | 10/69 (14%) | ||
FN3 | 3542..3611 | CDD:238020 | 13/74 (18%) | ||
FN3 | 3615..3701 | CDD:238020 | 22/98 (22%) | ||
fn3 | 3718..3784 | CDD:278470 | 18/71 (25%) | ||
FN3 | 3801..3887 | CDD:238020 | 20/90 (22%) | ||
FN3 | 3908..3971 | CDD:238020 | 18/68 (26%) | ||
FN3 | 3996..4086 | CDD:238020 | 33/98 (34%) | ||
FN3 | 4186..4284 | CDD:238020 | 26/98 (27%) | ||
fn3 | 4288..4366 | CDD:278470 | 14/77 (18%) | ||
FN3 | 4382..4465 | CDD:238020 | 10/82 (12%) | ||
FN3 | 4470..4553 | CDD:238020 | 28/98 (29%) | ||
FN3 | 4555..4653 | CDD:238020 | 25/106 (24%) | ||
FN3 | 4679..4753 | CDD:238020 | 14/103 (14%) | ||
fn3 | 4760..4830 | CDD:278470 | 16/82 (20%) | ||
FN3 | 4864..4955 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |