Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021323628.1 | Gene: | ptprq / 555426 | ZFINID: | ZDB-GENE-050419-183 | Length: | 2896 | Species: | Danio rerio |
Alignment Length: | 2183 | Identity: | 434/2183 - (19%) |
---|---|---|---|
Similarity: | 707/2183 - (32%) | Gaps: | 716/2183 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 97 AYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVAQAYKVDVEVLSAARGCTAILRCVVPTFVKEL 161
Fly 162 VRVVSWVHEPAIYIYPSLQGDGKFHLLPTGELLIHNLQESDESQSFRCRSMHRLTRQ-------- 218
Fly 219 ---VVVSS----------PTRLRINSHRGIISPSVVE---------------------HTAHVQV 249
Fly 250 SQDEGAVLLCVAQG--C---PSPEYSWFTHNGAGPLPVLSGPRVRLLGPILAIEAVTGEDSGVYK 309
Fly 310 CTAGNVGGEASAELRLTVATPI--QVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKDG 372
Fly 373 RQLPSSGRVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPG 437
Fly 438 PAVSLKCSAAGNPTPQI-------SWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDG 495
Fly 496 GEYACIAENRAGRVQ-HAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHW-ERGGR 558
Fly 559 ELPDDIRQRVQPD-GSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPKLSP-FQTNI 621
Fly 622 LQLNMGDRASLTCSVVK------GDLPLTINWRKDGRPIDPTQHMSV------------------ 662
Fly 663 KQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQAL---LVNVPP---------------- 708
Fly 709 --RWIVEPVDAN-----------------VERNRHI---------MLHCQ------AQGVPTPS- 738
Fly 739 --------------------IVWKKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYL 783
Fly 784 CQANNGIGTGIGKVIQLKV---NSSP--------YFSSTSRSVMVKKGDTALL------------ 825
Fly 826 -QCAVSGDKPINIVWMRSGKNTLNPSTNYKISV-KQEATPDGVSAELQIRTVDATDSGPYFCRAS 888
Fly 889 NLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIV------------ 941
Fly 942 ---------------------------------------EFREAD--------------HSLPPA 953
Fly 954 LFV----------------------------------------------------DQWQQ----- 961
Fly 962 --------IEVKDPPHFNA---------MIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQ 1009
Fly 1010 RPAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYKLSSSGNTAYNFTSVSGDGDGGN 1074
Fly 1075 GEL---------LLSGLAKFARYTVVVQAFNQVGPGPLS--EPTAAQTMEDVPSRPPEDVRCAAL 1128
Fly 1129 SSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSI 1193
Fly 1194 QVLAHTRMGDG-VVSKPLFCHSEEDVPEAPA-DIKVVSSSSQSLYISWLPPNEPNGVITKYSLYT 1256
Fly 1257 RVVNGREELNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARI 1321
Fly 1322 ISFGGPVVRPWRSTVTLPCTAVGKPK----REWFKSDVALRQGGLH--NSQLL------------ 1368
Fly 1369 -----DSGDLIISSLQLADG-GNYSCQV-------DNGIGTDRLTHTLIVQVP--PTAPVLYVTS 1418
Fly 1419 ATSSSILMHWKCGFTGNAPITGYTLFYRRANGNTDEMQLSRHASSHE--LKGLMCGSTYQIHLSA 1481
Fly 1482 QNKVGT----SPTSTILHVRT--QGQSPGHPASTALLAP------NSTSLLVRLHSWPDNGCPLL 1534
Fly 1535 YFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQAEFN---FVT 1596
Fly 1597 LTKDGDPPPPEIMHRGRSGQTTVIFANINLLIPTI-------AAVSGMFCTIIMIIVCYRHM--- 1651
Fly 1652 --LKNAPPLA-EQSQIQKESLE------NRANSEAAQRERYYATIHKVSMQNNDKIPETS---ED 1704
Fly 1705 ISPYATFQLSEAGGNMSQPHHGGPANTLLHSFMYHERALAEGCSSPPPAAS-KNRRRHSRKTEPE 1768
Fly 1769 SEESESDQDQLTSSRTESSNQHEGKIKHSIIYHGAQSSTSSDLSPMSEQKSLPRRGRSRYHHQQY 1833
Fly 1834 QFSTNTTPRHHNSNKMNNNTTSNTNTTATNTTATPSTS 1871 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam2 | NP_001261500.1 | Ig | 51..127 | CDD:299845 | 7/29 (24%) |
Ig | 138..>203 | CDD:299845 | 13/64 (20%) | ||
I-set | 238..327 | CDD:254352 | 22/114 (19%) | ||
Ig | 247..327 | CDD:299845 | 19/84 (23%) | ||
I-set | 332..418 | CDD:254352 | 9/85 (11%) | ||
IGc2 | 344..407 | CDD:197706 | 3/62 (5%) | ||
IG_like | 432..517 | CDD:214653 | 16/92 (17%) | ||
IGc2 | 436..507 | CDD:197706 | 14/77 (18%) | ||
I-set | 521..610 | CDD:254352 | 19/90 (21%) | ||
IGc2 | 533..597 | CDD:197706 | 12/65 (18%) | ||
Ig | 630..699 | CDD:143165 | 19/92 (21%) | ||
IG_like | 714..802 | CDD:214653 | 19/140 (14%) | ||
Ig | 725..802 | CDD:299845 | 15/112 (13%) | ||
Ig | 823..894 | CDD:143165 | 15/84 (18%) | ||
FN3 | 906..1006 | CDD:238020 | 36/238 (15%) | ||
FN3 | 1013..1111 | CDD:238020 | 30/108 (28%) | ||
FN3 | 1119..1209 | CDD:238020 | 21/90 (23%) | ||
FN3 | 1219..1313 | CDD:238020 | 27/94 (29%) | ||
Ig | 1336..1402 | CDD:143165 | 19/96 (20%) | ||
FN3 | 1409..1498 | CDD:238020 | 26/94 (28%) | ||
FN3 | 1515..1588 | CDD:238020 | 14/72 (19%) | ||
ptprq | XP_021323628.1 | fn3 | 209..278 | CDD:306538 | 13/79 (16%) |
FN3 | 301..363 | CDD:328772 | 15/81 (19%) | ||
FN3 | 382..470 | CDD:238020 | 22/109 (20%) | ||
FN3 | 475..569 | CDD:238020 | 20/96 (21%) | ||
FN3 | 723..808 | CDD:238020 | 17/87 (20%) | ||
FN3 | 829..>864 | CDD:238020 | 11/34 (32%) | ||
FN3 | <1033..1067 | CDD:238020 | 12/34 (35%) | ||
FN3 | 1072..1161 | CDD:238020 | 31/108 (29%) | ||
fn3 | 1170..1241 | CDD:306538 | 17/80 (21%) | ||
fn3 | 1264..1340 | CDD:306538 | 25/82 (30%) | ||
fn3 | 1368..>1410 | CDD:306538 | 8/44 (18%) | ||
FN3 | 1460..1549 | CDD:238020 | 26/95 (27%) | ||
FN3 | 1585..1670 | CDD:214495 | 21/118 (18%) | ||
FN3 | 1697..1768 | CDD:238020 | 14/75 (19%) | ||
FN3 | 1781..1872 | CDD:238020 | 20/108 (19%) | ||
fn3 | 1878..1958 | CDD:306538 | 2/9 (22%) | ||
FN3 | 2029..2133 | CDD:238020 | |||
FN3 | 2141..2235 | CDD:238020 | |||
FN3 | 2242..2338 | CDD:238020 | |||
UP_III_II | 2354..>2491 | CDD:297589 | |||
PTPc | 2599..2855 | CDD:214550 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 60 | 1.000 | Domainoid score | I10555 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |