DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam2 and tutl

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster


Alignment Length:1895 Identity:375/1895 - (19%)
Similarity:628/1895 - (33%) Gaps:597/1895 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 HNLQESDESQ------------SFRCR-SMHRLTRQVVVSSPTRLRINSHRGIISPSVVEHTAHV 247
            ||.::|.|.|            :.:|| .:.|.|...:.:|.|   :.:.....:...|:.|...
  Fly    20 HNTEKSKEQQQQSQPLEIPEQRASKCRGDIDRTTTTTIPASKT---LTASPAKTAAFTVKTTRRR 81

  Fly   248 QVSQDEGAVLLCVAQGCPSPEYSWFTHNGAGPLPVLSGPRVRLLGPIL-AIEAVTGEDSGVYKCT 311
            :..:......:||.           ...|.|..|.   |.:::|..:| ::.|:..:::     .
  Fly    82 RSRRRAEGSSICVP-----------IRRGQGSTPT---PTIQVLQFVLVSLLALLAKNA-----Q 127

  Fly   312 AGNVGGEA---SAELRLTVATPIQVEIS-----PNVLSVHMGGTAEFRCLVTSNGSPVGMQNILW 368
            |.|:..:|   :|.|...|.....||..     |.||        ::...|:..||.:.:  .:|
  Fly   128 AHNIPEDAVHITAILGEGVIFNCHVEFPNDHPVPYVL--------QWDKKVSETGSDLPI--YIW 182

  Fly   369 YKDGRQLPS------SGRV----ED------TLVVPRVSRENRGMYQCVV----RRPE----GDT 409
            |:   ..|.      .|||    :|      :|.:..:...::|.|:|.|    |.|:    |..
  Fly   183 YE---SYPEHIEEGYKGRVSRVSQDSPFGSASLNLTNIRESDQGWYECKVVFLNRDPKQHKNGTW 244

  Fly   410 F--QATAELQLGDAPPVLLYSFIEQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPL---PSNGRF 469
            |  ...|..:....|..::|      :..|.::.|.|.|.|.|||:|.|..|..|:   |:.|.|
  Fly   245 FHLDVHAPPRFSVTPEDIIY------VNLGDSIILNCQADGTPTPEILWYKDANPVDPSPTVGIF 303

  Fly   470 MIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLIP-KVTAVS 533
            ..|          :.:.||.:..||.|||.|||.|..|:|.|.||:.|.|...|.:.| ..|.:.
  Fly   304 NDG----------TELRISTIRHEDIGEYTCIARNGEGQVSHTARVIIAGGAVIMVPPTNQTKLE 358

  Fly   534 GETLNLKCPVAGYPIE-EIHWERGGRELPD----DIRQRVQPDGSLTISPVQKNSDSGVYTCWAR 593
            ||.:...|.....|.. .:.|.|.|..:.:    :.|..::.||||.|:|: |..|||.|.|...
  Fly   359 GEKVIFSCEAKAMPGNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI-KPDDSGQYLCEVT 422

  Fly   594 NKQGHSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSVVKGDLPLTINWRKDGRPIDPTQ 658
            |..|.....|..::|..|.|:: |...:..|.......:.|.:........:.|.||.|.::|.|
  Fly   423 NGIGDPQSASAYLSVEYPAKVT-FTPTVQYLPFRLAGVVQCYIKSSPQLQYVTWTKDKRLLEPYQ 486

  Fly   659 HMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNS--AAEVENSQALLVNVPPRWIVEP------- 714
            ...:  |...|..|:...:..:|.|.|:|...|:  .|.......:||..||.:.|||       
  Fly   487 MKDI--VVMANGSLLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEPETLYQRK 549

  Fly   715 VDANVERNRHIMLHC---QAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKE 776
            |..:||      :||   :|:|...|:|.|::..|.:..|.:..|.:     :..|::.:::::.
  Fly   550 VGDSVE------MHCDALEAEGTERPTIKWQRQEGEQLTESQRNRIK-----ISGGNITIENLRR 603

  Fly   777 DREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAVSGDKPINIVWMR 841
            :..|:|.|..:|.:.|.:                            |:.|..:.|.:        
  Fly   604 EDFGYYQCVVSNEVATLM----------------------------AVTQLVIEGTQ-------- 632

  Fly   842 SGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPP 906
                   |...|.|:.|                  ||:|                          
  Fly   633 -------PHAPYNITGK------------------ATES-------------------------- 646

  Fly   907 LPPSVLEAAMISSRSVNIKWQPKTLGTGDVTK-YIVEFREADHSLPPALFVDQWQQIEVKDPPHF 970
                          |:.::|.|...|..:..: |.:.||||.        |:.||.|.|......
  Fly   647 --------------SITLQWLPGYSGGSEYKQDYTIWFREAG--------VNDWQTISVTPSGST 689

  Fly   971 NAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAP 1035
            ...|..|...|.|.|:|:.....|....|:.:.|||....||.|     ....::|:...|:...
  Fly   690 QVTINGLASGTTYEFQVVGRNVLGDGMMSKVMTVRTLEDAPAAP-----RNVKAATQPPDSFFQL 749

  Fly  1036 LPELRHGDIQGY-NVGYKLSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQVG 1099
            :|:  ..|:..| ::.:...|.|...|:                             .......|
  Fly   750 MPD--EADLLAYFDIYFHTDSRGTLVYS-----------------------------PPKLRVKG 783

  Fly  1100 PGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQ 1164
            |.|               .||.:|....:|:..| ::||.|  .....:::.|.:.:........
  Fly   784 PKP---------------GPPRNVSVTEVSNGFL-ITWQSP--LERAHIVKFYTIKYRTDAQWKT 830

  Fly  1165 PSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPADIKVVS 1229
            .::.::...:|..|...|.|.|   .|..:|||:        |:..:..|:|.....||.:|..:
  Fly   831 LNRGQIRPEETQYLVKNLVGGR---TYYFRVLAN--------SEKSYESSDEVKFPVPARVKHKA 884

  Fly  1230 SSSQSLYISWLPPNEPNGVITKYSLY----------TRVVNGREELNNEKRSLPSQQAYYEAKGL 1284
            .::              ||:.....:          .::.|.|:....||               
  Fly   885 ITA--------------GVVGGILFFIVAIILSVCAVKICNKRKRRKQEK--------------- 920

  Fly  1285 HPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRPWRSTVTLPCTAVGKPKRE 1349
                |:..   .:.|:.:.::...::....||.... ||.|...::.::.|.....||:......
  Fly   921 ----EFNM---VACRITDARNIAANNHHLHNRSTGS-ISSGQVPLKKYKQTRISSLTAILIAILH 977

  Fly  1350 W-FKSDVALRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQVDNGIGTDRLTHTLIVQVPPTAPV 1413
            | :..|.......:::|..|:.||                 .|:|.|..|.:.:.|.:......|
  Fly   978 WIWPPDRCTNCHSIYSSPNLEDGD-----------------EDDGGGGRRRSVSRIQRSLDGRFV 1025

  Fly  1414 LYVTSATSSSILMHWKCGF------TGNAPITGYTLFYRRANGNTDEMQ-------LSRH----- 1460
            |.|...:        |.|:      :||..:....||.|| |.|..:..       |||.     
  Fly  1026 LDVEGVS--------KLGYSQQTLESGNVDVVDGGLFERR-NSNVSQKSSSDDGGFLSRRNFITA 1081

  Fly  1461 ---------ASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSPGHPASTALLAPNS 1516
                     |||.:|.......:.:..|....|:|                    |..:.:.|||
  Fly  1082 RASWRRPLVASSSQLSLQSAADSARGFLQGLLKIG--------------------AKQSAVPPNS 1126

  Fly  1517 TSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKP-------------QRRIVINN 1568
            .|                ||         |.........|.|:|             .|.:.||.
  Fly  1127 QS----------------YF---------DEAVSGARYQNVLRPYTSSNNLYGNADRSRPLHINT 1166

  Fly  1569 LQPSTLYQLRMEAHNVAGISQAEFNFVTLTKDGDPPPPE-IMHRGRSGQTTVIFANINLLIPTIA 1632
            :..|...|  .:.:..:.||:.   |.:..:...|...: ::..|.||.....|::::.:.|..:
  Fly  1167 ISGSLSQQ--QQLYTPSRISRI---FSSSPQQLQPHHQQLLLSSGGSGAYPTHFSDLSTVYPPNS 1226

  Fly  1633 A------VSGMFCTIIMIIVCYRHMLKNAPPLAEQSQIQKESLENRANSEAAQRERYYATIHKVS 1691
            |      :|..          ||:..:..|.|   ..||:|:...:      |::::....|.|.
  Fly  1227 AERSSHNLSSR----------YRYYSQELPSL---RTIQEETRRQQ------QQKQHPLEDHFVP 1272

  Fly  1692 MQNNDKIPETSEDISPYATFQLSEAGGNMSQPHHGGPANTLLHSFMYHERALAEGCSSPPPAASK 1756
            :|    :|......|.|.: |.|........|.|        ||.::..|.......||.|..:.
  Fly  1273 LQ----LPSPPSWRSYYQS-QASYRPRTRWYPRH--------HSRLFSNRQQQHEMLSPLPQLNL 1324

  Fly  1757 NRRRHSR----KTEPESEESESDQDQLTSSRTESSNQHEGKI----------------KHSIIYH 1801
            |.|....    :..|||..|.|      ...:::::.|.|..                |||..:.
  Fly  1325 NLRNSMNPGGLEASPESRSSSS------GFGSKNTSNHPGSTSEWRLLPPYRAPPSPPKHSGYFG 1383

  Fly  1802 GAQSSTSSDLSPMSEQKSLPRRGRSRYHHQQYQFSTNTTPRHHNS------NKMNNNTTSNT--- 1857
            |.|:           |...|        |..|.:...|||.:..:      :::|..|.||.   
  Fly  1384 GQQA-----------QGQTP--------HGSYSYPRATTPPYTMAHWLEMISRLNAATDSNLPKA 1429

  Fly  1858 -----------NTTATNTTATPSTSS--------------NSNKILSPRGGNLKSISSTF----K 1893
                       :......|.|||.||              ..:..|.|..|:|....:.:    :
  Fly  1430 PCPVDVGSVDGHYEFDPATPTPSASSMLREDLNLHIDTHPYHHHTLGPLSGSLLHSHAPYGGGAR 1494

  Fly  1894 SQDSIQCHIP 1903
            .|.|:..|:|
  Fly  1495 KQRSLPAHLP 1504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845 3/6 (50%)
I-set 238..327 CDD:254352 16/92 (17%)
Ig 247..327 CDD:299845 14/83 (17%)
I-set 332..418 CDD:254352 25/116 (22%)
IGc2 344..407 CDD:197706 17/86 (20%)
IG_like 432..517 CDD:214653 32/87 (37%)
IGc2 436..507 CDD:197706 27/73 (37%)
I-set 521..610 CDD:254352 27/94 (29%)
IGc2 533..597 CDD:197706 21/68 (31%)
Ig 630..699 CDD:143165 16/70 (23%)
IG_like 714..802 CDD:214653 20/97 (21%)
Ig 725..802 CDD:299845 16/79 (20%)
Ig 823..894 CDD:143165 10/70 (14%)
FN3 906..1006 CDD:238020 23/100 (23%)
FN3 1013..1111 CDD:238020 12/98 (12%)
FN3 1119..1209 CDD:238020 19/89 (21%)
FN3 1219..1313 CDD:238020 11/103 (11%)
Ig 1336..1402 CDD:143165 12/66 (18%)
FN3 1409..1498 CDD:238020 23/115 (20%)
FN3 1515..1588 CDD:238020 14/85 (16%)
tutlNP_001303307.1 V-set 137..250 CDD:284989 27/125 (22%)
IG_like 137..229 CDD:214653 22/104 (21%)
I-set 253..341 CDD:254352 34/103 (33%)
IGc2 268..331 CDD:197706 27/72 (38%)
I-set 346..437 CDD:254352 26/91 (29%)
Ig 349..437 CDD:299845 25/88 (28%)
Ig 459..530 CDD:299845 16/72 (22%)
IG_like 549..628 CDD:214653 21/117 (18%)
IGc2 551..617 CDD:197706 17/76 (22%)
FN3 633..725 CDD:238020 30/157 (19%)
FN3 786..874 CDD:238020 22/116 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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