DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam2 and dpr15

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster


Alignment Length:644 Identity:119/644 - (18%)
Similarity:196/644 - (30%) Gaps:202/644 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 NVGGEASAELRLTVATPIQVEIS-PNVLSVH----MGGTAEFRCLVTSNGSPVGMQNILWYKDGR 373
            |:.......||||.|....:.:| .||...|    ....|.....:..||:..|        |..
  Fly    93 NISNNGDQRLRLTAALEANLIMSNRNVQEQHSYRITQDNATSAASIAPNGTAFG--------DAP 149

  Fly   374 QLPSSGRVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTL--QP 436
            .:|.......|..:...:.......:...|||     .||..|:    ||..:..:  ||:  |.
  Fly   150 SIPIGVAPATTTTIDPATTTPTTTTRRTTRRP-----VATTTLK----PPPTIDDY--QTIISQA 203

  Fly   437 GPAVSLKCSAAGNPTPQISW---------TLDGFPLPSNGRFMIGQYITVHGDVIS------HVN 486
            |....|.|:........|||         |:|.....::.||.         .|.|      .:.
  Fly   204 GTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQTTFIADQRFQ---------SVFSPNPERWSLQ 259

  Fly   487 ISHVMVEDGGEYAC--IAENRAGRVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIE 549
            |.:|.::|.|.|.|  ..|.:|..:.|           :|::...|.:.||:..           
  Fly   260 IKYVQLKDEGTYECQVSTEPKASAIVH-----------LRIVEPKTELIGESTR----------- 302

  Fly   550 EIHWERGGR-ELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPK 613
              |.:.|.: :|...|.|.::|.               ::..|..|::                 
  Fly   303 --HVKAGSQVKLRCIISQALEPP---------------LFINWFYNQK----------------- 333

  Fly   614 LSPFQTNILQLNMGDRASLTCSVVKGDLPLTINWRKDGRPIDPTQHMSVKQVDQYNSILVIENLG 678
                     |:.:.:|......:.:.|||..:          ||  .|........:........
  Fly   334 ---------QIYLHNRRGWRTEIERIDLPAEV----------PT--TSTTTTTTTTTASTTTTTT 377

  Fly   679 SDHTGNYSCVVRNSAAEVENSQAL--LVNVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVW 741
            |......|.....|.....:|:.|  ||.:...:|::.:..|     .:.....|.||..     
  Fly   378 STTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQN-----DVSELGAAAGVAV----- 432

  Fly   742 KKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSP 806
              ||.:.:.:                  ||..|:       ...:.:|..||.|   .|...|:.
  Fly   433 --ATETSTAQ------------------LLTEVE-------ATSSTSGTSTGAG---LLASTSAA 467

  Fly   807 YFSSTSRSV-MVKKGDTALLQCAVSGDKPINIVWM-----------RSGKNTLNPSTNYKISVKQ 859
            |.:..:..: ....||:|......|       .|:           .:...|:.||:::   :||
  Fly   468 YAAGAAAGITTAATGDSAATAATTS-------AWLTTMDAEAATTAATTTTTMLPSSSF---IKQ 522

  Fly   860 EATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMIS 918
            ..|     |.|.|..|...|||.|.|..||   :..:.:.|.|.......|.:::..:|
  Fly   523 ITT-----ASLIIPAVVKLDSGNYTCSPSN---SAPRTIVLHVLNGEYSASAIKSGSVS 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352 4/12 (33%)
Ig 247..327 CDD:299845 4/12 (33%)
I-set 332..418 CDD:254352 17/90 (19%)
IGc2 344..407 CDD:197706 10/62 (16%)
IG_like 432..517 CDD:214653 24/103 (23%)
IGc2 436..507 CDD:197706 19/87 (22%)
I-set 521..610 CDD:254352 12/89 (13%)
IGc2 533..597 CDD:197706 10/64 (16%)
Ig 630..699 CDD:143165 9/68 (13%)
IG_like 714..802 CDD:214653 14/87 (16%)
Ig 725..802 CDD:299845 13/76 (17%)
Ig 823..894 CDD:143165 20/81 (25%)
FN3 906..1006 CDD:238020 2/13 (15%)
FN3 1013..1111 CDD:238020
FN3 1119..1209 CDD:238020
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 24/111 (22%)
V-set 204..290 CDD:284989 22/105 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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