DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam2 and Igsf10

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:XP_038958192.1 Gene:Igsf10 / 310448 RGDID:735030 Length:2647 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653
IGc2 436..507 CDD:197706
I-set 521..610 CDD:254352
IGc2 533..597 CDD:197706
Ig 630..699 CDD:143165
IG_like 714..802 CDD:214653
Ig 725..802 CDD:299845
Ig 823..894 CDD:143165
FN3 906..1006 CDD:238020
FN3 1013..1111 CDD:238020
FN3 1119..1209 CDD:238020
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
Igsf10XP_038958192.1 LRRNT 78..110 CDD:214470
leucine-rich repeat 89..108 CDD:275380
leucine-rich repeat 109..132 CDD:275380
LRR_8 131..191 CDD:404697
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
LRR_8 180..245 CDD:404697
leucine-rich repeat 181..204 CDD:275380
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..260 CDD:275380
PCC 242..>323 CDD:188093
LRRCT 269..>293 CDD:214507
Ig 532..605 CDD:416386
Ig strand A' 534..537 CDD:409353
Ig strand B 543..550 CDD:409353
Ig strand C 556..562 CDD:409353
Ig strand C' 564..566 CDD:409353
Ig strand D 577..581 CDD:409353
Ig strand E 584..589 CDD:409353
Ig strand F 597..605 CDD:409353
IG 632..712 CDD:214652
Herpes_BLLF1 <1189..1500 CDD:282904
Ig 1690..1763 CDD:416386
Ig strand B 1690..1694 CDD:409353
Ig strand C 1703..1707 CDD:409353
Ig strand E 1730..1734 CDD:409353
Ig strand F 1744..1749 CDD:409353
Ig strand G 1758..1761 CDD:409353
Ig 1768..1861 CDD:416386
Ig strand A 1768..1771 CDD:409353
Ig strand A' 1776..1780 CDD:409353
Ig strand B 1786..1795 CDD:409353
Ig strand C 1800..1805 CDD:409353
Ig strand C' 1808..1810 CDD:409353
Ig strand D 1819..1822 CDD:409353
Ig strand E 1827..1834 CDD:409353
Ig strand F 1840..1848 CDD:409353
Ig strand G 1851..1861 CDD:409353
Ig_3 1865..1944 CDD:404760
Ig strand A 1866..1869 CDD:409353
Ig strand A' 1875..1878 CDD:409353
Ig strand B 1884..1891 CDD:409353
Ig strand C 1897..1903 CDD:409353
Ig strand C' 1909..1911 CDD:409353
Ig strand D 1917..1922 CDD:409353
Ig strand E 1924..1928 CDD:409353
Ig strand F 1937..1945 CDD:409353
Ig strand G 1948..1958 CDD:409353
Ig_3 1965..2044 CDD:404760
putative Ig strand B 1980..1990 CDD:409353
putative Ig strand C 1996..2002 CDD:409353
putative Ig strand D 2018..2021 CDD:409353
putative Ig strand E 2023..2029 CDD:409353
putative Ig strand F 2036..2044 CDD:409353
IG_like 2077..2160 CDD:214653
Ig strand B 2078..2085 CDD:409353
Ig strand C 2093..2097 CDD:409353
Ig strand D 2122..2125 CDD:409353
Ig strand E 2126..2131 CDD:409353
Ig strand F 2139..2147 CDD:409353
Ig strand G 2153..2160 CDD:409353
IG 2178..2252 CDD:214652
IG_like 2283..2354 CDD:214653
Ig strand C 2294..2298 CDD:409353
Ig strand E 2320..2324 CDD:409353
Ig strand F 2334..2339 CDD:409353
Ig_3 2360..2439 CDD:404760
Ig strand B 2379..2383 CDD:409353
Ig strand C 2392..2396 CDD:409353
Ig strand E 2418..2422 CDD:409353
Ig strand F 2432..2437 CDD:409353
Ig_3 2455..2534 CDD:404760
Ig_3 2551..2633 CDD:404760
Ig strand A 2552..2555 CDD:409353
Ig strand A' 2561..2564 CDD:409353
Ig strand B 2570..2577 CDD:409353
Ig strand C 2583..2591 CDD:409353
Ig strand C' 2596..2598 CDD:409353
Ig strand D 2604..2610 CDD:409353
Ig strand E 2612..2616 CDD:409353
Ig strand F 2625..2633 CDD:409353
Ig strand G 2636..2646 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11140
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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