DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dscam2 and ttn-1

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:NP_001346715.1 Gene:ttn-1 / 266969 WormBaseID:WBGene00006436 Length:15188 Species:Caenorhabditis elegans


Alignment Length:1849 Identity:355/1849 - (19%)
Similarity:611/1849 - (33%) Gaps:551/1849 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVDWVHADGSAVTEIHGVRRVLR---NGTLV 89
            ::.|..|..|......:..:...|:....|.|.||::|.| ||..|.|    .|.||   :|.:.
 Worm 13452 IQRPPVVTRPLADATVTEGNRELLEVEVDGFPTPTIEWYH-DGKLVAE----SRTLRTYFDGRVA 13511

  Fly    90 LMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVAQAYKVDVEVLSAARGCTAILRCVV 154
            .:....|  |:: ||..|.|..||.:|.     |:.||:|.      ||...||...|.     :
 Worm 13512 FLKIYEA--HEE-HNGQYVCKVSNKLGA-----VETRAIVV------VEAPDAAEHVTQ-----M 13557

  Fly   155 PTFVKELVRVV-SWVHEPAIYIYPSLQGDGKFHLLPTGELL-IHNLQESDESQS-FRCRSMHRLT 216
            |||||:|..|| ....|.|.:...|       :..|..::: :||.:...:::| ::.|.....|
 Worm 13558 PTFVKKLQDVVLKTAGETATFTCQS-------YANPAAQVVWLHNGKALQQTKSNYKTRLFDDNT 13615

  Fly   217 RQVVVSSPTRLRINSHRGIISPSV--VEHTAHVQVSQD-----------------------EGAV 256
            ..:|:.:.|.....::..:.:...  |..:|.:.:|..                       |||.
 Worm 13616 ATLVIENVTDELCGTYTAVANNQFGDVHTSAQLTISGSEAKKIAASLPYFIIELKPKINVVEGAT 13680

  Fly   257 LLCVA--QGCPSPEYSWFTHNGAGPLPVLSGPRVRL----LGPILAIEAVTGEDSGVYKCTAGNV 315
            |...|  .|.|.||..|...|.    .::...|:::    :...|.:..|..||.|.|..||.|.
 Worm 13681 LSIQADLNGSPIPEVVWLKDNS----ELVESDRIQMKCDGVNYQLLVRDVGLEDEGTYTITAENE 13741

  Fly   316 GGE--------------------------------------------ASAELRLTVA-------- 328
            .|:                                            ||...::|:|        
 Worm 13742 KGKIRQNTEVSVTKSKEVKEKKEKKKVEKKDEGKKKPGRPGLPRPSGASKTEQVTMAFDAPSEGP 13806

  Fly   329 ---------TPIQVE----------------ISPN-----------------------VLSVHMG 345
                     .|.|.|                ::||                       .|.....
 Worm 13807 ADSYEVERRCPDQREWVSCGSTKSLELEIKGLTPNTEYIFRVAGKNKQGLGEWSEMTSTLKTASV 13871

  Fly   346 GTA-----------------EFRCLVTSNGSPVGMQNILWYKDGRQLPSSGRVE-----DTLVVP 388
            |.|                 ||...|..:|:|.  .::.|||:..|:....:::     .:.::.
 Worm 13872 GQAPQFTISPQSKIIANRDDEFEIAVEFSGTPT--PSVKWYKENLQIVPDEKIDVATTSTSSILN 13934

  Fly   389 RVSRENRGMYQCVVRRPEGDTFQATAELQ---------LGDAP---------PVLLYSFIEQTLQ 435
            ..|:|..|.:.|::   |.:..||:|..|         |...|         |.|..:...::.|
 Worm 13935 LKSQEENGTFNCLI---ENELGQASASCQVTIFNKPASLQSTPDHSLERNLVPTLQKALNNESAQ 13996

  Fly   436 PGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYAC 500
            .|..:.|.|..:......::|..|...:.|.||:.:......:..::.|.    |..:|.|:|.|
 Worm 13997 AGQQIMLTCRISSRSESTVAWFKDDERIESAGRYELSSDKKSNHKLVCHA----VQSQDTGKYRC 14057

  Fly   501 IAENRAGRVQHAARLNIYGL------PYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRE 559
            :..|:.|..:....:.:..:      .:...:...||:.|..:.|:|.|.|.|..|:.|.:.|..
 Worm 14058 VVTNKYGYAESECNVAVEDVTKFIAPSFSATLSDSTAILGHNITLECKVEGSPAPEVSWTKDGER 14122

  Fly   560 LPDD--IRQRVQPDGS--LTISPVQKNSDSGVYTCWARNKQGHS--------ARRSGEVTVIV-- 610
            :...  |||....:|:  |:||..: :.|.|||.|.|.:..|..        |:.:|..:.:|  
 Worm 14123 ISTTRRIRQTQDENGNCKLSISKAE-SDDMGVYVCSATSVAGVDSTSSMVMIAKTTGTDSHLVIA 14186

  Fly   611 --------PPKLSPFQTNILQLNMGDRASLTCSVVKGDLPLTINWRKDGRPIDPTQ---HMSVKQ 664
                    .|:.:....:::::|...:.:|....| |:...|:.|.||||.|..|.   |..|  
 Worm 14187 QTADEKHEKPRFTRAPPSLIEVNESGQFTLIAKAV-GEPKPTVTWLKDGREILRTNRIYHHFV-- 14248

  Fly   665 VDQYNSILVIENLGSDHTGNYSCVVRN-SAAEVENSQAL---------LVNVPPRWIVEPVDANV 719
            .....|.|:.|.:.|..:|.:||...| :...:..:|.:         |.||.|::.:...|..:
 Worm 14249 TGDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQVIVQRMKPANQLANVAPKFTIPLTDMGI 14313

  Fly   720 ERNRHIMLHCQAQGVPTPSIVW--------KKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKE 776
            .......|.|...|.|.|::.|        |....|.:.::.|.|   |.|:   ..|..:.|..
 Worm 14314 VNGHPTTLSCNVTGSPEPTLEWIYIDDSGHKINLTSSTTDWTECR---FGKV---AELKSERVLR 14372

  Fly   777 DREGFYLCQANNGIGTGIGKVIQLKVNSS------PYFSSTSRSVMVKKGDTALLQCAVSGDKPI 835
            ::.|.|.|.|.|..|....:...|....|      |.|....:.......::......::|....
 Worm 14373 EQRGTYQCIATNSSGQATTQCYLLVGELSDEPAGPPRFVKCLQDTWTPLKESIEFSVELAGFPTP 14437

  Fly   836 NIVWMRSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQL 900
            ::.|..:.|. :|...:.||:.     |...::.|.|:.|.....|.||..|||::|..:...:|
 Worm 14438 DLTWYHNEKK-INEGKDVKITF-----PSDTTSVLSIKNVSLASLGMYFVEASNIHGVLRTAGRL 14496

  Fly   901 QVQ------EPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADHSLPPA------ 953
            .|.      |||....|||..:..        |||       ..:..|...|..|...|      
 Worm 14497 NVSDERRKAEPPQFKHVLEPVLAV--------QPK-------VAFSEEHPRASSSAATARVKKGA 14546

  Fly   954 --LFVDQWQQIEVKD--------------PPH----------FNAMIENLK-PATRYAFRVIAEG 991
              :|:...:.:::|.              .||          ..|:.::|: ...|.:.....|.
 Worm 14547 APMFLQGLEDMDLKAGASAAVAGKLGRKLRPHRSTTNDADKLAKALAQSLRLDEPRASIDSRPES 14611

  Fly   992 SAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTE--------LLISWVAPLPELRHGDIQG-- 1046
            :|..:.......:.:..:|...|...:..:|....|        ..||. .|:|:: |.|.:|  
 Worm 14612 AANAALDEVRAAINSRNKRVCRPKFMVKPKPRKVLEEYKSLRLKTAISG-NPMPQV-HWDKEGII 14674

  Fly  1047 ---------YNVG-------YKLSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAF 1095
                     ||.|       :.:|:.....||.|:.:.:|                    ::...
 Worm 14675 LETGNKYSIYNDGDFYYLEVHHVSTFDKGFYNCTAANNEG--------------------IITCT 14719

  Fly  1096 NQVGPGPLSEPTAAQT--------------MEDVPSRPPED------VRCAALSSQSLQVSWQPP 1140
            :::...|..|.:|||.              :|.:|.|...:      |.|:..:.....:.|   
 Worm 14720 SEIDVLPNKEDSAAQVAKRKSRKEAKAPNFIEVLPGRSQANLNESLCVECSVSAYPCASIIW--- 14781

  Fly  1141 PIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVL----AHTRM 1201
                                                            |..|:::|    .:|..
 Worm 14782 ------------------------------------------------TRNSVRLLPQADRYTMS 14798

  Fly  1202 GDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREELN 1266
            .||.      |.|.:.:...|.|....:..:         .||....:|..:|....|:      
 Worm 14799 YDGE------CASLKFISVTPGDEGTYACEA---------VNELGSAVTNMNLQVSGVD------ 14842

  Fly  1267 NEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRP 1331
                  |:     .|:|:.|...:: .:.:..:|.:|  |||       .:.|.::....|:...
 Worm 14843 ------PN-----AAEGIPPLFRFE-KIKSVRKVVDG--SRV-------ELAAELVQASEPLQIR 14886

  Fly  1332 W-RSTVTLPCTAVGKPKREWFKSDVALRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQVDNGIG 1395
            | |:.||:    |..|...:.:|:         |...|...|:...     |||.|:.:..|..|
 Worm 14887 WLRNKVTI----VDSPSFSYSRSE---------NMVFLTIADVFPE-----DGGEYTVEAKNQSG 14933

  Fly  1396 TDRLTHTLIVQ-----VPPTAPVLY---VTSATSSSILMHWKCGFTGNA-PITGYTLFYRRANGN 1451
            ..|.|..|.|:     |...||.::   .|:.:...:.:..:....|:. |:..:|...::.  |
 Worm 14934 IARCTMQLDVRNNERSVADEAPRVFDFEPTTRSDPGVSVELRAKVIGHPDPVISWTKAGQKL--N 14996

  Fly  1452 TDEMQLSRHASSH---ELKGLMCGSTYQIHLSAQNKVGTSPTSTILHV----RTQGQSP---GHP 1506
            .:|..:.|:....   .:..:......:..|:|.|..|.:.....|.|    :|.|..|   ..|
 Worm 14997 NEEKYMMRNEGDKFILRIANVTRADAGKYELTAINPSGQANAELELTVVQSTKTVGAKPKFNESP 15061

  Fly  1507 ASTALLAPNSTSLLVRLHSWPDNGCPLLY 1535
            .|......|...|.......|...|...|
 Worm 15062 ISVQTCEKNRAELRASFSGTPAPACRWFY 15090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845 25/78 (32%)
Ig 138..>203 CDD:299845 18/66 (27%)
I-set 238..327 CDD:254352 27/163 (17%)
Ig 247..327 CDD:299845 25/152 (16%)
I-set 332..418 CDD:254352 25/155 (16%)
IGc2 344..407 CDD:197706 15/84 (18%)
IG_like 432..517 CDD:214653 17/84 (20%)
IGc2 436..507 CDD:197706 15/70 (21%)
I-set 521..610 CDD:254352 27/100 (27%)
IGc2 533..597 CDD:197706 22/67 (33%)
Ig 630..699 CDD:143165 21/72 (29%)
IG_like 714..802 CDD:214653 22/95 (23%)
Ig 725..802 CDD:299845 21/84 (25%)
Ig 823..894 CDD:143165 17/70 (24%)
FN3 906..1006 CDD:238020 20/132 (15%)
FN3 1013..1111 CDD:238020 22/123 (18%)
FN3 1119..1209 CDD:238020 9/99 (9%)
FN3 1219..1313 CDD:238020 16/93 (17%)
Ig 1336..1402 CDD:143165 16/65 (25%)
FN3 1409..1498 CDD:238020 15/99 (15%)
FN3 1515..1588 CDD:238020 5/21 (24%)
ttn-1NP_001346715.1 IG 105..177 CDD:214652
I-set 205..285 CDD:333254
I-set 406..493 CDD:333254
I-set 821..914 CDD:333254
Ig 962..1032 CDD:319273
I-set 1135..1215 CDD:333254
I-set 1679..1767 CDD:254352
Ig 1789..>1845 CDD:319273
Atrophin-1 <1957..2285 CDD:331285
I-set 2381..2468 CDD:333254
I-set 2489..2578 CDD:333254
I-set 2631..2717 CDD:333254
I-set 2732..2815 CDD:333254
Ig 2848..2909 CDD:319273
I-set 2924..3007 CDD:333254
RNase_E_G <3161..3303 CDD:331378
RNase_E_G <3356..3556 CDD:331378
RNase_E_G <3506..3673 CDD:331378
RNase_E_G <3595..3803 CDD:331378
RNase_E_G <3722..3912 CDD:331378
RNase_E_G <3875..4073 CDD:331378
FtsK <4014..>4556 CDD:332908
RNase_E_G <4346..4567 CDD:331378
RNase_E_G <4525..4723 CDD:331378
RNase_E_G <4746..4936 CDD:331378
RNase_E_G <4858..5044 CDD:331378
FtsK <4960..>5541 CDD:332908
Neuromodulin_N <5525..6250 CDD:331332
Neuromodulin_N <6198..6681 CDD:331332
V-ATPase_G_2 <6559..>6683 CDD:330366
I-set 7448..7535 CDD:333254
FN3 7540..7630 CDD:238020
MDN1 <7687..8197 CDD:331582
Neuromodulin_N <7944..8780 CDD:331332
Ig 8886..>8935 CDD:325142
FN3 9052..9142 CDD:238020
Neuromodulin_N <9210..9875 CDD:331332
Neuromodulin_N <9583..10392 CDD:331332
IG_like 10597..>10662 CDD:214653
Ig 10711..10773 CDD:325142
FN3 10777..10870 CDD:238020
FN3 10883..10958 CDD:238020
FN3 10984..11070 CDD:238020
I-set 11077..11165 CDD:333254
IG 11179..11259 CDD:214652
I-set 11264..11350 CDD:333254
I-set 11368..11446 CDD:333254
FN3 11450..11543 CDD:238020
FN3 11565..11645 CDD:238020
I-set 11823..11903 CDD:333254
I-set 11918..11996 CDD:333254
FN3 12006..12097 CDD:238020
FN3 12131..12217 CDD:238020
I-set 12225..12313 CDD:333254
Ig 12337..12411 CDD:325142
FN3 12415..12503 CDD:238020
PKc_like 12566..12815 CDD:328722
I-set 12894..12985 CDD:254352
I-set 13024..13114 CDD:333254
I-set 13123..13206 CDD:254352
Ig 13249..13314 CDD:319273
I-set 13331..13421 CDD:254352
I-set 13456..13545 CDD:254352 30/107 (28%)
I-set 13558..13650 CDD:254352 21/98 (21%)
I-set 13663..13753 CDD:254352 22/93 (24%)
FN3 13778..13864 CDD:238020 9/85 (11%)
Ig 13893..13963 CDD:325142 17/74 (23%)
I-set 13984..14074 CDD:333254 19/93 (20%)
I-set 14083..14168 CDD:254352 25/85 (29%)
Ig_3 14195..14275 CDD:316449 22/82 (27%)
Ig_3 14302..14384 CDD:316449 20/87 (23%)
I-set 14408..14498 CDD:333254 20/95 (21%)
I-set 14634..14724 CDD:333254 18/111 (16%)
IG_like 14754..14838 CDD:214653 19/149 (13%)
I-set 14854..14943 CDD:333254 26/116 (22%)
I-set 14969..15044 CDD:254352 11/76 (14%)
Ig_3 15054..15132 CDD:316449 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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