Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936733.1 | Gene: | Ncam1 / 24586 | RGDID: | 67378 | Length: | 1136 | Species: | Rattus norvegicus |
Alignment Length: | 1491 | Identity: | 311/1491 - (20%) |
---|---|---|---|
Similarity: | 479/1491 - (32%) | Gaps: | 520/1491 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 325 LTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYK-DGRQL-PSSGRV------ 381
Fly 382 --EDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPGPAVSLKC 444
Fly 445 SAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRV 509
Fly 510 QHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRE--LPDDIRQRVQPDG 572
Fly 573 SLTISPVQKNSDSGVYTCWAR-NKQGHSARRSGEVTVIVPPKLSPFQTNI-LQLNMGDRASLTCS 635
Fly 636 VVKGDLPLTINWRKDGRPIDPTQHMSVKQV-DQYNSILVIENLGSDHTGNYSCVVRNSAAEVENS 699
Fly 700 QALLVNVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLL 764
Fly 765 GNG-----------SLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVK 818
Fly 819 KGDTALLQCAVSGDKPINIVWMRSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPY 883
Fly 884 FCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKW-QPKTLGTGDVTKYIVEFR--- 944
Fly 945 -EADHSLPPALFVDQWQQIEVKDPPHFN----AMIENLKPATRYAFRVIAEGSAGRSAPSQELIV 1004
Fly 1005 RTEPQR---PAGPPLSLSARPLSSTELLISWVAPLPELRHGD------------------IQGYN 1048
Fly 1049 VGY--KLSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQVGPGPL-------- 1103
Fly 1104 SEPTAAQTMEDVPSRPPE------------------------DV------RCAALSSQSLQVSWQ 1138
Fly 1139 PPPIYHTNGLLQGYKLIF------EPII-----DDIQPSKD---EVESRKTTALTMVLTGLRKYT 1189
Fly 1190 NYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPAD-----------IKVVSSSSQSLYISW-LPP 1242
Fly 1243 NEPNGVITKYSLYTRVVNGREELNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSR 1307
Fly 1308 VSSQITTNRIPARIISFGGPVVRPWRSTVTLPCTAVGKPKREWFKSDVALRQGGLHNSQLLDSGD 1372
Fly 1373 LIISSLQLADGGNYSCQVDNGIGTDRLTHTLIVQVPPT---APVLYVTSATSSSILMHWKCGFTG 1434
Fly 1435 NAPITGYTLFYRRANGNTDEMQLSRHASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQ 1499
Fly 1500 GQSPGHPASTALLAPNSTSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRI 1564
Fly 1565 VINNLQPSTLYQLRMEAHNVAGISQAEFNFVT----LTKD-----GDPPPPEIMHRGRSGQTTVI 1620
Fly 1621 FANINLLIPTIAAVSGMFCTIIMIIVCYRHMLKNAPPLAEQSQIQKESLENRANSEAAQRE 1681 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam2 | NP_001261500.1 | Ig | 51..127 | CDD:299845 | |
Ig | 138..>203 | CDD:299845 | |||
I-set | 238..327 | CDD:254352 | 1/1 (100%) | ||
Ig | 247..327 | CDD:299845 | 1/1 (100%) | ||
I-set | 332..418 | CDD:254352 | 24/95 (25%) | ||
IGc2 | 344..407 | CDD:197706 | 17/72 (24%) | ||
IG_like | 432..517 | CDD:214653 | 10/84 (12%) | ||
IGc2 | 436..507 | CDD:197706 | 10/70 (14%) | ||
I-set | 521..610 | CDD:254352 | 20/91 (22%) | ||
IGc2 | 533..597 | CDD:197706 | 16/66 (24%) | ||
Ig | 630..699 | CDD:143165 | 20/69 (29%) | ||
IG_like | 714..802 | CDD:214653 | 27/98 (28%) | ||
Ig | 725..802 | CDD:299845 | 26/87 (30%) | ||
Ig | 823..894 | CDD:143165 | 22/70 (31%) | ||
FN3 | 906..1006 | CDD:238020 | 29/108 (27%) | ||
FN3 | 1013..1111 | CDD:238020 | 28/125 (22%) | ||
FN3 | 1119..1209 | CDD:238020 | 17/133 (13%) | ||
FN3 | 1219..1313 | CDD:238020 | 24/105 (23%) | ||
Ig | 1336..1402 | CDD:143165 | 12/65 (18%) | ||
FN3 | 1409..1498 | CDD:238020 | 17/91 (19%) | ||
FN3 | 1515..1588 | CDD:238020 | 4/72 (6%) | ||
Ncam1 | XP_038936733.1 | IgI_1_NCAM-1 | 20..116 | CDD:409451 | 24/120 (20%) |
Ig strand B | 37..41 | CDD:409451 | 1/3 (33%) | ||
Ig strand C | 51..55 | CDD:409451 | 1/3 (33%) | ||
Ig strand E | 79..83 | CDD:409451 | 2/3 (67%) | ||
Ig strand F | 93..98 | CDD:409451 | 2/4 (50%) | ||
Ig strand G | 107..110 | CDD:409451 | 1/2 (50%) | ||
IG_like | 124..190 | CDD:214653 | 25/142 (18%) | ||
Ig strand B | 135..139 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 148..152 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 172..176 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 186..191 | CDD:409353 | 2/4 (50%) | ||
IgI_3_NCAM-1 | 211..308 | CDD:143207 | 28/97 (29%) | ||
Ig strand B | 231..235 | CDD:143207 | 1/3 (33%) | ||
Ig strand C | 244..248 | CDD:143207 | 1/3 (33%) | ||
Ig strand E | 271..275 | CDD:143207 | 2/3 (67%) | ||
Ig strand F | 285..290 | CDD:143207 | 2/4 (50%) | ||
Ig strand G | 298..301 | CDD:143207 | 0/2 (0%) | ||
IgI_NCAM-1 | 307..413 | CDD:143277 | 28/106 (26%) | ||
Ig strand B | 326..330 | CDD:143277 | 1/3 (33%) | ||
Ig strand C | 339..343 | CDD:143277 | 2/3 (67%) | ||
Ig strand E | 379..383 | CDD:143277 | 2/3 (67%) | ||
Ig strand F | 393..398 | CDD:143277 | 2/4 (50%) | ||
Ig strand G | 406..409 | CDD:143277 | 0/2 (0%) | ||
Ig_3 | 422..494 | CDD:404760 | 22/77 (29%) | ||
Ig strand B | 433..437 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 446..450 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 473..477 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 487..492 | CDD:409353 | 2/4 (50%) | ||
FN3 | 509..606 | CDD:238020 | 29/110 (26%) | ||
fn3 | 619..701 | CDD:394996 | 23/88 (26%) | ||
Herpes_BLLF1 | <842..1133 | CDD:282904 | 87/470 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |