Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_501339.2 | Gene: | rig-4 / 177597 | WormBaseID: | WBGene00004371 | Length: | 2325 | Species: | Caenorhabditis elegans |
Alignment Length: | 1787 | Identity: | 391/1787 - (21%) |
---|---|---|---|
Similarity: | 661/1787 - (36%) | Gaps: | 393/1787 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 249 VSQDEGAVLLCVA-QG------CPSPE----YSWFTHNGAGPLPVLSGPRVRLLGPILAIEAVTG 302
Fly 303 EDSGVYKCTAGNVGGEASAELRLTVATP-----------------IQVEISPNVLSVHMGGTAEF 350
Fly 351 RCLVTSNGSPVGMQNI----LWYKDGRQ---------LPSSGRVEDTLVVPRVSRENRGMYQCVV 402
Fly 403 RRPEGDTFQ--ATAELQLGD---APPV-----LLY-----SFIEQTLQPGPAVSLKCSAAGNPTP 452
Fly 453 QISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEY--ACIAENRAGRV--QHAA 513
Fly 514 RLNIYGLPYIRLIP-KVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTIS 577
Fly 578 PVQKNSDSGVYTCWARNKQGHSAR----RSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSVVK 638
Fly 639 GDLPLTINWRKDGRPIDPTQHMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQALL 703
Fly 704 VNVPPRWIVEPVDANVERNR-HIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNG 767
Fly 768 SLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSS---PYFSSTSRSVMVKKGDTALLQCAV 829
Fly 830 SGD--KPINIVWMR-------SGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFC 885
Fly 886 RASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISS---RSVNIKWQPKTLGTGDVTKYIVEFREAD 947
Fly 948 HSLPPALFVDQWQQIE----VKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEP 1008
Fly 1009 QR-PAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYKLSSSGNTAYNFTSVSGDGDG 1072
Fly 1073 GNGELLLSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSW 1137
Fly 1138 QPPPIYHTNGLLQGYKLIF---EPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHT 1199
Fly 1200 RMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREE 1264
Fly 1265 LNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEG--KSSRVSSQITTNRIPAR--IISFG 1325
Fly 1326 GPVVRPWRSTVTLPCTAVGKPKREWFKSDVALRQ----GGLHNSQLL---------DSGDLIISS 1377
Fly 1378 LQLADGGNYSCQVDN--GIGT----DRLTHTLIVQVPPTAPV--LYV--TSATSSSI------LM 1426
Fly 1427 HWKCGFTGNAPITGYTLFYRRANG-NTDEMQL-SRHASSHELKGLMCGSTYQIHLSAQNKVGTS- 1488
Fly 1489 PTSTILHVRTQGQSP-GHPASTALLAPNSTSLLVRLHSW------PDNGCPLLYFVLQYRAVTDD 1546
Fly 1547 PDAEWVLVSNA----LKPQRRIV--INNLQPSTLYQLRMEAHNVAG---ISQAEFNFVTLTKDGD 1602
Fly 1603 PPPPEIMHRGRSGQTTVIFANINLLIPTIAAVSGMFCTIIMIIVCY------RHMLKNAPPLAEQ 1661
Fly 1662 SQIQKESLENRANSEAAQRERYYATIHKVSMQNNDKIPETSEDISPYATFQLSEAGGNMSQPHHG 1726
Fly 1727 GPANTLLHSFMYHE-------------RALAEGCSSPPPAASKNRRRHSRKTEPESEESESDQDQ 1778
Fly 1779 LTSSRTESSNQHEGKIKHSIIYHGAQSS------------TSSDLSPMSE-QKSLPRRGRSRYHH 1830
Fly 1831 QQYQFSTNTTPRHHNSNKMN----NNTTSNTN 1858 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam2 | NP_001261500.1 | Ig | 51..127 | CDD:299845 | |
Ig | 138..>203 | CDD:299845 | |||
I-set | 238..327 | CDD:254352 | 22/88 (25%) | ||
Ig | 247..327 | CDD:299845 | 22/88 (25%) | ||
I-set | 332..418 | CDD:254352 | 20/100 (20%) | ||
IGc2 | 344..407 | CDD:197706 | 16/75 (21%) | ||
IG_like | 432..517 | CDD:214653 | 19/88 (22%) | ||
IGc2 | 436..507 | CDD:197706 | 13/72 (18%) | ||
I-set | 521..610 | CDD:254352 | 27/93 (29%) | ||
IGc2 | 533..597 | CDD:197706 | 22/63 (35%) | ||
Ig | 630..699 | CDD:143165 | 7/68 (10%) | ||
IG_like | 714..802 | CDD:214653 | 22/88 (25%) | ||
Ig | 725..802 | CDD:299845 | 19/76 (25%) | ||
Ig | 823..894 | CDD:143165 | 16/79 (20%) | ||
FN3 | 906..1006 | CDD:238020 | 25/106 (24%) | ||
FN3 | 1013..1111 | CDD:238020 | 27/97 (28%) | ||
FN3 | 1119..1209 | CDD:238020 | 26/92 (28%) | ||
FN3 | 1219..1313 | CDD:238020 | 23/95 (24%) | ||
Ig | 1336..1402 | CDD:143165 | 13/84 (15%) | ||
FN3 | 1409..1498 | CDD:238020 | 26/101 (26%) | ||
FN3 | 1515..1588 | CDD:238020 | 17/87 (20%) | ||
rig-4 | NP_501339.2 | IG_like | 330..402 | CDD:214653 | 24/79 (30%) |
IGc2 | 338..393 | CDD:197706 | 22/62 (35%) | ||
I-set | 459..543 | CDD:254352 | 24/101 (24%) | ||
IGc2 | 478..534 | CDD:197706 | 17/65 (26%) | ||
IG_like | 553..639 | CDD:214653 | 19/101 (19%) | ||
Ig | 564..635 | CDD:143165 | 16/83 (19%) | ||
FN3 | 643..747 | CDD:238020 | 25/106 (24%) | ||
FN3 | 756..850 | CDD:238020 | 27/96 (28%) | ||
FN3 | 858..954 | CDD:238020 | 26/97 (27%) | ||
FN3 | 959..1042 | CDD:238020 | 21/84 (25%) | ||
FN3 | 1057..1151 | CDD:238020 | 17/104 (16%) | ||
FN3 | 1156..1251 | CDD:238020 | 26/101 (26%) | ||
FN3 | 1258..1356 | CDD:238020 | 21/106 (20%) | ||
FN3 | 1361..1453 | CDD:238020 | 24/112 (21%) | ||
FN3 | 1464..1560 | CDD:238020 | 20/113 (18%) | ||
FN3 | 1572..1664 | CDD:238020 | 7/29 (24%) | ||
FN3 | 1679..1764 | CDD:238020 | |||
FN3 | 1774..1858 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |