DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam2 and dscam

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:XP_031751619.1 Gene:dscam / 100216449 XenbaseID:XB-GENE-921689 Length:2039 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653
IGc2 436..507 CDD:197706
I-set 521..610 CDD:254352
IGc2 533..597 CDD:197706
Ig 630..699 CDD:143165
IG_like 714..802 CDD:214653
Ig 725..802 CDD:299845
Ig 823..894 CDD:143165
FN3 906..1006 CDD:238020
FN3 1013..1111 CDD:238020
FN3 1119..1209 CDD:238020
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
dscamXP_031751619.1 Ig 26..121 CDD:416386
Ig strand A' 33..37 CDD:409353
Ig strand B 40..49 CDD:409353
Ig strand C 55..61 CDD:409353
Ig strand C' 63..66 CDD:409353
Ig strand D 72..75 CDD:409353
Ig strand E 80..85 CDD:409353
Ig strand F 98..106 CDD:409353
Ig strand G 109..121 CDD:409353
Ig 124..217 CDD:416386
Ig strand A' 127..136 CDD:409353
Ig strand B 140..147 CDD:409353
Ig strand C 157..162 CDD:409353
Ig strand C' 164..167 CDD:409353
Ig strand D 172..176 CDD:409353
Ig strand E 179..185 CDD:409353
Ig strand F 193..201 CDD:409353
Ig strand G 205..217 CDD:409353
Ig strand A 225..228 CDD:409353
Ig strand A' 234..237 CDD:409353
IG_like 236..310 CDD:214653
Ig strand B 242..249 CDD:409353
Ig strand C 255..260 CDD:409353
Ig strand C' 262..264 CDD:409353
Ig strand D 270..274 CDD:409353
Ig strand E 276..280 CDD:409353
Ig strand F 289..297 CDD:409353
Ig strand G 300..310 CDD:409353
Ig 313..395 CDD:416386
Ig strand A 314..319 CDD:409353
Ig strand A' 322..326 CDD:409353
Ig strand B 329..339 CDD:409353
Ig strand C 344..350 CDD:409353
Ig strand C' 351..354 CDD:409353
Ig strand E 368..374 CDD:409353
Ig strand F 381..389 CDD:409353
Ig 406..501 CDD:416386
Ig strand A 406..409 CDD:409353
Ig strand A' 415..419 CDD:409353
Ig strand B 422..431 CDD:409353
Ig strand C 436..442 CDD:409353
Ig strand C' 444..447 CDD:409353
Ig strand D 452..460 CDD:409353
Ig strand E 464..473 CDD:409353
Ig strand F 480..488 CDD:409353
Ig strand G 491..501 CDD:409353
Ig 504..593 CDD:416386
Ig strand A 505..507 CDD:409353
Ig strand A' 512..516 CDD:409353
Ig strand B 519..526 CDD:409353
Ig strand C 533..539 CDD:409353
Ig strand C' 540..542 CDD:409353
Ig strand D 549..553 CDD:409353
Ig strand E 557..563 CDD:409353
Ig strand F 571..579 CDD:409353
Ig strand G 583..593 CDD:409353
Ig 596..686 CDD:416386
Ig strand A 597..599 CDD:409353
Ig strand A' 604..608 CDD:409353
Ig strand B 611..620 CDD:409353
Ig strand C 625..632 CDD:409353
Ig strand C' 634..636 CDD:409353
Ig strand D 643..648 CDD:409353
Ig strand E 651..658 CDD:409353
Ig strand F 665..673 CDD:409353
Ig strand G 676..685 CDD:409353
Ig_DSCAM 689..784 CDD:409397
Ig strand B 707..711 CDD:409397
Ig strand C 720..724 CDD:409397
Ig strand E 749..753 CDD:409397
Ig strand F 763..768 CDD:409397
Ig strand G 777..780 CDD:409397
Ig_DSCAM 785..885 CDD:409398
Ig strand B 805..809 CDD:409398
Ig strand C 818..822 CDD:409398
Ig strand E 849..853 CDD:409398
Ig strand F 863..868 CDD:409398
Ig strand G 876..879 CDD:409398
FN3 886..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1093..1185 CDD:238020
FN3 1190..1279 CDD:238020
Ig_3 <1303..1364 CDD:404760
Ig strand B 1304..1311 CDD:409353
Ig strand C 1317..1322 CDD:409353
Ig strand C' 1327..1333 CDD:409353
Ig strand D 1337..1341 CDD:409353
Ig strand E 1343..1347 CDD:409353
Ig strand F 1356..1364 CDD:409353
Ig strand G 1367..1377 CDD:409353
FN3 1381..1471 CDD:238020
FN3 1497..1568 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4848
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 965 1.000 Inparanoid score I326
OMA 1 1.010 - - QHG47134
OrthoDB 1 1.010 - - D10185at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9434
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1391
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.080

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