DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam2 and dscaml1

DIOPT Version :9

Sequence 1:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:2212 Identity:683/2212 - (30%)
Similarity:1030/2212 - (46%) Gaps:260/2212 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWISSRFFVILLLLNLDNTCSEP-FEAHLRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVD 64
            ||:    ..:|||.:.....||. ....|.   ||.....||.||:|.|..|.|.|.|:|...:.
Zfish    70 MWL----VTLLLLYSFQEVHSEDVVSTRLY---FVNASLQRVTFSSSVGVSLPCPAGGAPHAVLR 127

  Fly    65 WVHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVV 129
            |..|.|..:.::..:|.|..||||.|.||:.:|::..:|:..|.|.|.|..|:|.|..::|:||.
Zfish   128 WYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGKIRSPSIRVKAVF 192

  Fly   130 AQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQGDGKFHLLPTGELL 194
            .:.|.|.|....:.||..|:.:|::|:.|:|.|.|||| .:..:.|.|.    .:|.|...|.|.
Zfish   193 REPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSW-EKDTVSIVPG----NRFFLTSYGALY 252

  Fly   195 IHNLQESDESQSFRCRSMHRLTRQVVVSSPTRLRINSHRGIISPSVVEHTAHVQVSQDEGAV--- 256
            |.::|:.|...::||.:.|:.:.:...|:..||      .::.|:  |.|..|..|...|.|   
Zfish   253 ISDVQKEDALSTYRCITKHKYSGETRQSNGARL------SVLDPT--ESTPSVMDSFQSGEVQVG 309

  Fly   257 ----LLCVAQGCPSPEYSWFTHNGAGPLPVLSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGG 317
                |.|:|.|.|:|...|.  ....|||..|....||.|  |.|..:..||||.|.|...|..|
Zfish   310 RSIELPCIASGYPNPTIRWL--KDGRPLPADSRWTRRLTG--LTISDLRLEDSGNYICEVTNSFG 370

  Fly   318 EASAELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKD------GRQLP 376
            .......|.|..|::|.:||..|...:..|....|.|  .|||  ...:.|:::      .:...
Zfish   371 SKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAV--QGSP--HFTVSWFRNTEPIVPDQHFS 431

  Fly   377 SSGRVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPGPAVS 441
            ..|...:||.:....:.:.|.|||...| :|.|.|..:.:.|.|..|.::.||.|:.:.||...|
Zfish   432 IQGAHNETLFITAAQKRHSGAYQCFATR-KGQTAQDFSIILLEDGTPRIVSSFSERVVAPGEPFS 495

  Fly   442 LKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRA 506
            |.|:|.|.|.|.|:||||..|:..:......||....|..:||||:::..:.|||.|.|.|.|.|
Zfish   496 LMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVNVTNPQIRDGGVYRCAARNSA 560

  Fly   507 GRVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPD 571
            |..::.||:|:.|.|.||.:..:|||:|....:.|.|.|||...|.|.:.|..|||:.||.|..:
Zfish   561 GSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYKDGMLLPDNHRQVVYEN 625

  Fly   572 GSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSV 636
            |:|.:|.|||..|.|.|.|....:...|..::..|||.|||.:.||  :....::|....:.|.|
Zfish   626 GTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPF--DFPPTSIGKLMYIACVV 688

  Fly   637 VKGDLPLTINWRKDGRPI-DPTQHMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQ 700
            ..||:|:.|.|||||:.| ..|..::: :..::.|.|.|..:...|.|||:|:..|.||.|.:.:
Zfish   689 SSGDMPIRITWRKDGQEIVSGTAGVTI-ETKEFMSSLQISKVSLKHNGNYTCIASNDAATVSSER 752

  Fly   701 ALLVNVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFT---K 762
            .|:|.||||:.|:|.:.:....:..:|:|..:|.|.|.:|||.|.|  .|..::....|.|   :
Zfish   753 QLIVTVPPRFRVQPNNQDGIYGKSEVLNCSVEGYPPPKVVWKHAKG--IGNPQQYHPVPLTGRIQ 815

  Fly   763 LLGNGSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQC 827
            :|.|||||::||.|:..|:|||||:||:|:.|.|.:.|.|......:|...:.|..||....|.|
Zfish   816 ILSNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMMLTVKIPAMITSHPNTTMAIKGQNKELNC 880

  Fly   828 AVSGDKPINIVWMRSGKNTLNPSTN--YKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNL 890
            ...|:.||.|.|.| |...::|..|  |.|:.......|.|.:.|:::..:..||..:.|.|.|.
Zfish   881 TARGEYPIIIRWER-GDTVIDPDRNPRYSITTSPNEKSDEVISTLKLKPAERGDSVFFSCHAINS 944

  Fly   891 YGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADHSLPPALF 955
            ||..:.|:||.|||||.||. ||...:..||:|::|..:..|...:|.|.:|::...        
Zfish   945 YGEGRGLIQLTVQEPPDPPE-LEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKS-------- 1000

  Fly   956 VDQWQQIEVK------DPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGP 1014
             |.|   |:|      .|.:..|.|..|.||:.|:.|:.:....|||..|:||.:.||...|.||
Zfish  1001 -DPW---ELKHATRKISPTNNQANIVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGP 1061

  Fly  1015 PLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYKLSSSG-NTAYNFTSVSGDGDGGNGELL 1078
            |:.:..:|::|..:.::|.||..||::|.|:||.:||:.:..| |..|:...:...||  :....
Zfish  1062 PMEVILQPMTSQSIRVTWKAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGD--SEVYT 1124

  Fly  1079 LSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIY 1143
            |..|.|||:|.|||||||:.|.||.|....|.|:|||||:||::||...::|....::|..||..
Zfish  1125 LDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRM 1189

  Fly  1144 HTNGLLQGYKLIFEPIIDD-----------IQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLA 1197
            ..||:|:||:::|..:..|           :.....|:::..||...:.|.||.|:||||:||||
Zfish  1190 TLNGVLKGYRVVFWSLYPDGGGCCGGQTLGLNQKWGEMQNITTTREQVELKGLEKFTNYSVQVLA 1254

  Fly  1198 HTRMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGR 1262
            :|:.||||.|..|:..:.||.|..||.||.|.||:.|:.:|||||.:|||:|.||::|.......
Zfish  1255 YTQAGDGVRSNVLYIQTREDHPGPPAGIKAVPSSASSVVVSWLPPVKPNGIIRKYTIYCSSPGSG 1319

  Fly  1263 EELNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQIT---TNRIPARIISF 1324
            :...:|..:.| :...|....|....:|..|..|.|..|.|   .:|.::|   ..:.||:|:||
Zfish  1320 QPAPSEYEANP-ELLIYRITHLTRGQQYLIWAAAVTTAGRG---NISEKVTVEPAGKAPAKILSF 1380

  Fly  1325 GGPVVRPWRSTVTLPCTAVGKPKR--EWFKSD----VALRQGGLHNSQLLDSGDLIISSLQLADG 1383
            ||.|..||...|.|||::||:|..  :|.|..    :.:.|.|..|  :|.:|.|::.|::..|.
Zfish  1381 GGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRN--ILSNGTLVLRSVKAEDS 1443

  Fly  1384 GNYSCQVDNGIGTDRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGFTGNAPITGYTLFYRRA 1448
            |.|:|...|.:|.|.:...|:|||||..|.|.|::.::|||.:.|..|..|.:.|.|:.|.|  :
Zfish  1444 GYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQY--S 1506

  Fly  1449 NGNTDEMQ---LSRHASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSP----GHP 1506
            ..||:|.:   :|....|.:|..|.||:.|::.|:|:|.||....|.|:..:|.|:.|    ..|
Zfish  1507 VDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQP 1571

  Fly  1507 ASTALLAPNSTSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQP 1571
            ..|.:   |||...:.|..|...|||:...:|::|     |...|...|........|.:..|:.
Zfish  1572 LFTHI---NSTHARMNLQGWTSGGCPITAVLLEFR-----PKGTWAWQSVRTNASADIFLAELRE 1628

  Fly  1572 STLYQLRMEAHNVAGISQAEFNFVTLTKDGDPPPPEIMHRGRSGQTTVIFANINLLIPTIAAVSG 1636
            :|.|:|:|:|.|.||.......|.||..||...||....||.......:|   ::..|.|....|
Zfish  1629 ATWYELKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDVKKLF---SIGCPVILVTLG 1690

  Fly  1637 MFCTIIMIIVCYR-----HMLKNAPPLAEQ--SQIQKESLENRANSEAAQRERYYATIHKVSMQN 1694
            |  .::.||...|     ..|::|..|||.  |.....|.:..... ..|..|.:..|.:|.:..
Zfish  1691 M--ALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKG-PPQGPRLHIDIPRVQLLI 1752

  Fly  1695 NDK------------IPETSEDISPYATFQLSEAGGNMSQP---HHGGPANTL------------ 1732
            .||            ||.|..:.|.....|....|.::..|   .:.||...:            
Zfish  1753 EDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSR 1817

  Fly  1733 -----LHSF--MYHERALAEGCSSPPPAASKNRRRHSRKTEPESEESESDQDQLTSSRTESSNQH 1790
                 .||.  .|..:.....|.:..||.:......:..::.....:|||      |.:.|.:|.
Zfish  1818 KSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESD------SYSASLSQD 1876

  Fly  1791 EGKIKHSIIYHGAQSSTSSDLSPMSEQKSLPRRGRSRYHHQQYQFS-TNTTPRHHNSNKMNNNTT 1854
            ..|.::|::...:.|||..:|:...|...|..      |.|..:|. |.......:|::|...| 
Zfish  1877 TDKGRNSMVSTESASSTYEELARAYEHAKLEE------HLQHAKFEITECFISDSSSDQMTTGT- 1934

  Fly  1855 SNTNTTATNTTATPSTSSNSNKILSP-------RGGNLKSISSTFKSQDSIQCHIPTLVKS---- 1908
             |.|..:..:.:|||.........||       ||.|: ::....::..|..|::|..:|:    
Zfish  1935 -NDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNV-AVPIPHRANKSEYCNLPLYMKTDPFF 1997

  Fly  1909 -----------------PSISTQQQKQFHKQQLQNSSTNNSQHSSSNPNSSSLKQQQPLLITPKL 1956
                             .||.:...:.:|.|         .:|.:.:|:    |||...|....|
Zfish  1998 RKQAELHDPCPVVPPREASIRSLAARAYHTQ---------GRHMTLDPS----KQQALTLGHGGL 2049

  Fly  1957 HQLEANGQELLGLDGIGNSPLVACMPPSSQFRPIPHKSI-MPAHEPPHHHNHSQQSHPHQQQQQQ 2020
            ..|.::|..  |..|..:|........||....:|.::: ||:       ..|..|.|       
Zfish  2050 SSLTSSGAS--GTSGPPSSGAAGSSSISSGTATLPQRTLTMPS-------TSSTSSAP------- 2098

  Fly  2021 QHPGTLLNPSTAMLSSKFFTAPTLPKXDTANGGSEYVGGAMEAM-----DGFG----YDSGEISC 2076
              .|.:...:.|..||...:.||        .||..|||:.:::     .|.|    .::|..|.
Zfish  2099 --SGAVAAGAGASASSTGGSGPT--------PGSSKVGGSRDSLLESSSSGLGRLQKQNAGAYSK 2153

  Fly  2077 TY 2078
            :|
Zfish  2154 SY 2155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam2NP_001261500.1 Ig 51..127 CDD:299845 27/75 (36%)
Ig 138..>203 CDD:299845 20/64 (31%)
I-set 238..327 CDD:254352 32/95 (34%)
Ig 247..327 CDD:299845 29/86 (34%)
I-set 332..418 CDD:254352 22/91 (24%)
IGc2 344..407 CDD:197706 15/68 (22%)
IG_like 432..517 CDD:214653 33/84 (39%)
IGc2 436..507 CDD:197706 29/70 (41%)
I-set 521..610 CDD:254352 35/88 (40%)
IGc2 533..597 CDD:197706 25/63 (40%)
Ig 630..699 CDD:143165 25/69 (36%)
IG_like 714..802 CDD:214653 35/90 (39%)
Ig 725..802 CDD:299845 34/79 (43%)
Ig 823..894 CDD:143165 23/72 (32%)
FN3 906..1006 CDD:238020 31/105 (30%)
FN3 1013..1111 CDD:238020 39/98 (40%)
FN3 1119..1209 CDD:238020 36/100 (36%)
FN3 1219..1313 CDD:238020 32/93 (34%)
Ig 1336..1402 CDD:143165 23/71 (32%)
FN3 1409..1498 CDD:238020 31/91 (34%)
FN3 1515..1588 CDD:238020 23/72 (32%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653 25/71 (35%)
Ig 112..183 CDD:143165 25/70 (36%)
Ig 194..287 CDD:299845 30/103 (29%)
I-set 302..380 CDD:254352 27/81 (33%)
IGc2 309..370 CDD:197706 23/64 (36%)
IGc2 399..458 CDD:197706 14/62 (23%)
I-set 477..571 CDD:254352 37/93 (40%)
Ig 477..567 CDD:299845 35/89 (39%)
IG_like 581..662 CDD:214653 30/80 (38%)
IGc2 588..646 CDD:197706 25/57 (44%)
Ig 684..751 CDD:143165 25/67 (37%)
IG_like 686..756 CDD:214653 26/70 (37%)
I-set 760..855 CDD:254352 38/96 (40%)
Ig7_DSCAM 778..855 CDD:143211 34/78 (44%)
IG_like 865..956 CDD:214653 29/91 (32%)
Ig 873..963 CDD:299845 32/90 (36%)
FN3 959..1053 CDD:238020 32/106 (30%)
FN3 1060..1157 CDD:238020 39/98 (40%)
FN3 1165..1271 CDD:238020 37/105 (35%)
FN3 1276..1367 CDD:238020 32/94 (34%)
IGc2 1392..1455 CDD:197706 21/64 (33%)
FN3 1486..1559 CDD:238020 24/74 (32%)
FN3 1573..1649 CDD:238020 24/83 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 73 1.000 Domainoid score I9230
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 917 1.000 Inparanoid score I353
OMA 1 1.010 - - QHG47134
OrthoDB 1 1.010 - - D10185at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6394
orthoMCL 1 0.900 - - OOG6_101656
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1391
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

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