Sequence 1: | NP_729220.2 | Gene: | corn / 38786 | FlyBaseID: | FBgn0259173 | Length: | 1107 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648627.1 | Gene: | Srrm1 / 39483 | FlyBaseID: | FBgn0036340 | Length: | 954 | Species: | Drosophila melanogaster |
Alignment Length: | 796 | Identity: | 162/796 - (20%) |
---|---|---|---|
Similarity: | 264/796 - (33%) | Gaps: | 238/796 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 PGNCDGS--DSGLDVASCCHSRITLQRGLSSTSGGYTSSNGLEEIYDSCELKVTTVAQTPSETGS 104
Fly 105 EKTSPPR-----RTGSVKKKVAMFEPEPTGTPAKDQLRGRVA------------NLKRAESLPRN 152
Fly 153 SAAPGTPGTPSTHRDKARLSTSSFRVPSTTGTPSSSRLARPQKPDTLPNALNRAQSVQRLTQVQR 217
Fly 218 -----TPSLSRARTPGTPSDDGRWPANRGAARRGMSVTPEVTTNRMRGSPAPGGTLPRRRKQQSV 277
Fly 278 EDLTGG----RLSRSNSISRAAIVDARMTSSVMVVPTSRRSLAPAAAKVNSLRRPQPATPRTRIY 338
Fly 339 -----------HETAVQTALTSEDLEQVLGGGLLQTRAVDAV----------------EQRNQST 376
Fly 377 QAEPDQREFELEQLRHEVRQLSGKLQREREEKLAMQQELHLNTERVMGMLELARVVSASAGTPTS 441
Fly 442 ED----SGDGSGH----DSLLMLESQIQISGHELFERQQEIGQLRSMCRALQLEMRRSLATQQLL 498
Fly 499 LQEKAAIEQESSELQDFLQHEKAAQCDALRDLEADYQAVKLQLANREEEAKVLRDECRHLVRLNE 563
Fly 564 QRRQ----------ENRLLQTKFTALENKSRELI--HQQNASVAGASTALSGL--HSRLDGLVEQ 614
Fly 615 LVYSYSISEQDLEDIRFQAETEHVQNGQRPNGLDLPICPAASGDAIHTLVLASDGSLS------- 672
Fly 673 -------------PQRNQSFIAAVIGAIRQATTHSGKRLSLRQAGKKNGVGLGSAQAVSAGTQGQ 724
Fly 725 EPQGN---GDDSDSTE 737 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
corn | NP_729220.2 | PHA03247 | <92..336 | CDD:223021 | 67/269 (25%) |
SMC_prok_B | <340..627 | CDD:274008 | 60/324 (19%) | ||
Srrm1 | NP_648627.1 | PWI | 43..113 | CDD:279781 | |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3004 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |