DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment melt and Veph1

DIOPT Version :9

Sequence 1:NP_523953.2 Gene:melt / 38785 FlyBaseID:FBgn0023001 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_006502205.1 Gene:Veph1 / 72789 MGIID:1920039 Length:867 Species:Mus musculus


Alignment Length:1017 Identity:320/1017 - (31%)
Similarity:482/1017 - (47%) Gaps:224/1017 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHELFNKVLAKRDLSRAGDLFSVPDADIVDDITEVLSEISPIISHADYVKNNNDQSVVEICVTRV 65
            ||:||..||.::|||:||||||:.||:|.|.:||.|.:|..|.|..||..|||||:|||||:||:
Mouse    35 MHQLFRLVLGQKDLSKAGDLFSLDDAEIEDSLTEALEQIKVISSSLDYQTNNNDQAVVEICITRI 99

  Fly    66 LSCIRETKTAERYCAALVDLLRTCLLWNLQPSGTTKEEPPHAKIAADIISSIFLNYDKKELMKIA 130
            .:.||||::.|::..|||.|..:||..||:|:| ..|:.||||||:||:|.|..||::..:|.:|
Mouse   100 TTAIRETESIEKHARALVGLWDSCLEHNLRPAG-KDEDTPHAKIASDIMSCILQNYNRTPVMVLA 163

  Fly   131 LPVAVQFLPKGNRELSRNLASYLSLAAIDHAGLLSPHTESVMESILSGNYGLLRVLSQVYEVAPE 195
            :|:||:||.:|::||.||:::|||||||..|.||:.|||.:::|||.||..|||||..|||..|:
Mouse   164 VPIAVKFLHRGSKELCRNMSNYLSLAAITKADLLADHTEGIIKSILQGNAMLLRVLPAVYEKQPQ 228

  Fly   196 AVTPHAPLLMPLLPQCDPQERMAVFQ-LYLLIVQKSPEVLESCVPQLCGSLLDSDTSSITMQILL 259
            .:..|...|:.|:.|.:..|:..:.: |::...:|..||::.|||.|..:|.||..:.|.:.||:
Mouse   229 PINRHLAELLALMSQLEQTEQYHLLRLLHVAAKRKDVEVVQKCVPFLIRNLKDSTYNDIILNILI 293

  Fly   260 KLSQHSPSLLVDHFEQLRLAAKTNPGTIPLCAQIMTTAGIGSKETAQQALDFVLEHL-----PTQ 319
            :::.|.|..|......|:..|:..|......|:|....|...:|.|:..|.:::..|     |..
Mouse   294 EIAGHEPLALNSFLPMLKEIAEQFPYLTGQMARIFGAVGHVDEERARSCLRYLVSQLANMEHPFH 358

  Fly   320 ALLQQEATRLCSAYPVLFTDKVLACVRQKN-----AALSSQQDVGNGLAN----KTSGGVTIV-- 373
            .:|..|...:..|:..:.........|..|     |.|.|:| :.|..|:    |||..|:|.  
Mouse   359 HILLLEIKSITDAFSSILGPHSRDIFRMSNSFTNIAKLLSRQ-LENSKADSSRRKTSTEVSIPEK 422

  Fly   374 --SLNSSSP-SPPLKPVPVGAPAINTTIVQPASVVSATPTPPPSSASAPIASSTPVSAATPTPQH 435
              .|||..| |...:.:.|...|....|                            :|.:.||  
Mouse   423 LRELNSMEPESEDHEKLQVKIQAFEDKI----------------------------NAESNTP-- 457

  Fly   436 AGYTRRVKLGDSRSTGRLHPASNTHRSVTRLNVASGSVGGLHKSMTRLSNSQINQQPGGSSNGNV 500
             |..||..|.        |.:....:|:                  |.|.|:             
Mouse   458 -GSGRRYSLD--------HISKEERKSI------------------RFSRSR------------- 482

  Fly   501 VVQSGATPKTPTGLSNPPVTPVPPLSNNVVITGHNRHGIPV------TSGGVTVTTSPSKVRPHS 559
                                   .|:.|.|:|    :|:.|      ...|:..:.|.|::.|.|
Mouse   483 -----------------------SLALNTVLT----NGVSVEDNEVEEKAGMHASISLSQIDPLS 520

  Fly   560 QGPSTLLNSSTVLMKYSTDALNQSVGSISIPQSAAVATLPSTQTQNAVSVHHASPALPQSASNGH 624
            .|...|        .:.||.                               |.||....|||   
Mouse   521 HGIGKL--------PFKTDT-------------------------------HGSPLRNSSAS--- 543

  Fly   625 AKSVMKLPVNGNSEVIVSGPTTNVAPRRSDNTSRTLLNANSVMDQRMSTFEPYQIMRDPVQQFCE 689
                       :..:|.:.|.| :.....:|....:|.|.:      |..| ||   |.:.....
Mouse   544 -----------HPSIIHTEPET-MPETFKENIQEEILEAAT------SPIE-YQ---DKLYLHLR 586

  Fly   690 KNFNSIKSYMDEVSQHLPPPTRCSIEVSNEFAERRTKKVAKLHFACQIRGPHCLYSKTCFTMRTR 754
            :|.:.:|:|..|:::.:|.|.:|:||      :.....||||.|.|.::|.:|||||:.|.:.::
Mouse   587 ENLSKVKAYALEIAKKVPIPDQCTIE------DTMRSCVAKLFFTCSLKGHYCLYSKSSFILVSQ 645

  Fly   755 NPKTWIHMMFLDFQVRHFVKEKCVLSTRESGISNLKNIWQILKCEN---RSFTELVT-SQFPQVK 815
            .|:.||.:|||..|  ....|.  ||.:...:..||.:|:  |.::   .||...:| |.|||.|
Mouse   646 APQPWIQVMFLSQQ--SLFPEP--LSIQSGSVQFLKALWE--KTQDTGAHSFEVAMTESTFPQQK 704

  Fly   816 DREILVNELRHSGFLDVFEVSKTDKSNPNCNELEYQWGCFLCNHPDKAVGFLNGSNQPMIEGQLK 880
            |.|.|...|....|.|||..|:|..:          |.||:||:|:||. .:|...||:|||:||
Mouse   705 DLEQLQLHLEEVRFFDVFGFSETAGA----------WQCFMCNNPEKAT-VVNQDGQPLIEGKLK 758

  Fly   881 EKKGKWRLFRRWRTRYFTLSGAHLSC-KGSSGGE----SIDVNQIRSVKV---SRGARNIPKAFE 937
            ||:.:|:..:||:|.||||:|..|.. ||.|..:    .|::::::|||.   .|..|::|:|||
Mouse   759 EKQVRWKFIKRWKTHYFTLAGNQLLFQKGKSKDDPDDSPIELSKVQSVKAVAKKRRDRSLPRAFE 823

  Fly   938 IFTADQTLILKPKDGKNAEEWVQCLSIVVAHSQARDNPTAKT 979
            |||..:|.:.|.||.||||||:||:::.:|.::.|::....|
Mouse   824 IFTDSKTYVFKAKDEKNAEEWLQCINVALAQAKERESREVTT 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meltNP_523953.2 PH_MELT_VEPH1 872..972 CDD:269965 48/107 (45%)
PH 873..967 CDD:278594 46/101 (46%)
Veph1XP_006502205.1 PH_MELT_VEPH1 750..858 CDD:269965 48/107 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839744
Domainoid 1 1.000 352 1.000 Domainoid score I1009
eggNOG 1 0.900 - - E1_KOG3723
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11624
Inparanoid 1 1.050 443 1.000 Inparanoid score I1632
Isobase 1 0.950 - 0 Normalized mean entropy S7287
OMA 1 1.010 - - QHG46394
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007078
OrthoInspector 1 1.000 - - oto95385
orthoMCL 1 0.900 - - OOG6_108321
Panther 1 1.100 - - LDO PTHR21630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4653
SonicParanoid 1 1.000 - - X5168
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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