DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acbp3 and acbp-4

DIOPT Version :9

Sequence 1:NP_001163366.1 Gene:Acbp3 / 38783 FlyBaseID:FBgn0250836 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_498609.1 Gene:acbp-4 / 186372 WormBaseID:WBGene00018949 Length:146 Species:Caenorhabditis elegans


Alignment Length:75 Identity:22/75 - (29%)
Similarity:37/75 - (49%) Gaps:4/75 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FEEATELANKFTK----KPTDAEFLEFYGLFKQATVGDVNIEKPGALALKDKAKYEAWSSNKGLS 64
            ||.|..:.|...|    |.:..:.|:.|.|:||||.|..:..:|....::.:.|:.||:....:.
 Worm     9 FEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKWNAWNQLGNMD 73

  Fly    65 KEAAKEAYVK 74
            :..||..||:
 Worm    74 EAEAKAQYVE 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acbp3NP_001163366.1 ACBP 4..84 CDD:294152 22/75 (29%)
acbp-4NP_498609.1 ACBP 5..93 CDD:238248 22/75 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63566
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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