DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msl-3 and EAF3

DIOPT Version :9

Sequence 1:NP_523951.1 Gene:msl-3 / 38779 FlyBaseID:FBgn0002775 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_015348.1 Gene:EAF3 / 856134 SGDID:S000006227 Length:401 Species:Saccharomyces cerevisiae


Alignment Length:536 Identity:90/536 - (16%)
Similarity:170/536 - (31%) Gaps:214/536 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PLFHKGEIVLCYEPDKSKARVLYTS-----------------------------KVLNVFERRNE 44
            ||.::.:|:..::|...    :|||                             :::|       
Yeast    20 PLMYEAKILKIWDPSSK----MYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIIN------- 73

  Fly    45 HGLRFYEYKIHFQGWRPSYDRCVRATVLLKDTEENRQLQRELAEAAKLQIRGDYSYKGTPDKPSA 109
             |..|:   ||:|||:.|:|..|....:....|||..:::.||..||      .:.|...::...
Yeast    74 -GKCFF---IHYQGWKSSWDEWVGYDRIRAYNEENIAMKKRLANEAK------EAKKSLLEQQKK 128

  Fly   110 KK--------KRGGKA---AHVEEPIVVPMDTGHLEAEHEMAPTPRAAGNRTRDNSGGKRKEKPP 163
            ||        ..|||.   :.....|........|.:......:.|::.|.....|..:......
Yeast   129 KKLSTSLGGPSNGGKRKGDSRSNASISKSTSQSFLTSSVSGRKSGRSSANSLHPGSSLRSSSDQN 193

  Fly   164 SGDGRLKGNRGRQTETFYNNAINDVSVYNHVPQEDRIMMRVSERLRELIEYDRNMIKVLGKQHAL 228
            ..|.|      |::.:...|.::.::.|    ...:|.:::..:|:.::..|...:....|...|
Yeast   194 GNDDR------RRSSSLSPNMLHHIAGY----PTPKISLQIPIKLKSVLVDDWEYVTKDKKICRL 248

  Fly   229 PARVPIVTIMENFVKQQAVELAISIKQDSSRARNTQSRNARMEREYDRVMSTVCMLKEVVDGLRI 293
            ||.|.:..::..:..:.:.||         .:..:||:                 |.|...||::
Yeast   249 PADVTVEMVLNKYEHEVSQEL---------ESPGSQSQ-----------------LSEYCAGLKL 287

  Fly   294 YFEFHVDDHLLYTEEKEYVHNYLTDDNMRNCSLILNKSYEYINPSGDTELIGLDGTPVVEGSGDT 358
            ||:..:.:.|||..|:                                                 
Yeast   288 YFDKCLGNMLLYRLER------------------------------------------------- 303

  Fly   359 NGQIGVINIGGPEYEKQLQKCLLYIVTASGKNTAQAYERTSPYTAAYKLPVEMRGFLNETFKWRL 423
                       .:|::.|:|        |.|:                                 
Yeast   304 -----------LQYDELLKK--------SSKD--------------------------------- 316

  Fly   424 LSAESPPEKSMVFGAPHLVRLMIKMP-------MFLNASPISNKKLED----LLPHLDAFINYLE 477
               :.|.....::||.||:||:..:|       |.|.:..:..|:.||    ||.|:|.:.|..:
Yeast   317 ---QKPLVPIRIYGAIHLLRLISVLPELISSTTMDLQSCQLLIKQTEDFLVWLLMHVDEYFNDKD 378

  Fly   478 NHREWFDRENFVNSTA 493
            .:|.  |...:||:::
Yeast   379 PNRS--DDALYVNTSS 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-3NP_523951.1 MRG 196..486 CDD:283390 47/300 (16%)
EAF3NP_015348.1 CD_CSD 13..105 CDD:421697 20/99 (20%)
MRG 198..378 CDD:399022 49/319 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344424
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3001
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.