DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-3 and AT4G37280

DIOPT Version :9

Sequence 1:NP_523951.1 Gene:msl-3 / 38779 FlyBaseID:FBgn0002775 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_568021.1 Gene:AT4G37280 / 829882 AraportID:AT4G37280 Length:320 Species:Arabidopsis thaliana


Alignment Length:474 Identity:86/474 - (18%)
Similarity:145/474 - (30%) Gaps:202/474 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRATVLLK 74
            ||.:||.||.|...:     :|.:||..|..|:.|     ::|.:|:.||..::|..|.|..|||
plant    28 LFSEGERVLAYHGPR-----VYGAKVQKVELRKKE-----WKYFVHYLGWNKNWDEWVSADRLLK 82

  Fly    75 DTEENRQLQRELAEAAKLQIRGDYSYKGTPDKPSAKKKRGGKAAHVEEPIVVPMDTGHLEAEHEM 139
            .||||...|:.|.:...::       |||....||:.|....|           ||         
plant    83 HTEENLVKQKALDKKQGVE-------KGTKSGRSAQTKTRSSA-----------DT--------- 120

  Fly   140 APTPRAAGNRTRDNSGGKRKEKPPSGDGRLKGNRGRQTETFYNNAINDVSVYNHVPQEDRIMMRV 204
                :|..:.|:.|:...:|.|..||:.:                       ::|..|..:.:::
plant   121 ----KADKDDTKTNAAKGKKRKHESGNEK-----------------------DNVTAEKLMKIQI 158

  Fly   205 SERLRELIEYDRNMIKVLGKQHALPARVPIVTIMENFVKQQAVELAISIKQDSSRARNTQSRNAR 269
            ...|::.:..|...|....|...||....:..|:..:       |....|:|.            
plant   159 PASLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKY-------LEFKTKKDG------------ 204

  Fly   270 MEREYDRVMSTVCMLKEVVDGLRIYFEFHVDDHLLYTEEKEYVHNYLTDDNMRNCSLILNKSYEY 334
                  .|..:|.   |::.|:|.||:..:...|||.:|:......:.||               
plant   205 ------MVTDSVA---EILKGIRSYFDKALPVMLLYKKERRQYQESIVDD--------------- 245

  Fly   335 INPSGDTELIGLDGTPVVEGSGDTNGQIGVINIGGPEYEKQLQKCLLYIVTASGKNTAQAYERTS 399
                                                                           ||
plant   246 ---------------------------------------------------------------TS 247

  Fly   400 PYTAAYKLPVEMRGFLNETFKWRLLSAESPPEKSMVFGAPHLVRLMIKMPMFLNASPISNKKLED 464
            |                                |.|:||.||:||.:|:|...:...:..:....
plant   248 P--------------------------------STVYGAEHLLRLFVKLPDLFSYVNMEEETWSR 280

  Fly   465 LLPHLDAFINYLENHREWF 483
            :...|..|:.:::.::..|
plant   281 MQQTLSDFLKFIQKNQSTF 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-3NP_523951.1 MRG 196..486 CDD:283390 40/288 (14%)
AT4G37280NP_568021.1 Tudor-knot 31..82 CDD:288553 19/60 (32%)
MRG 135..299 CDD:283390 44/324 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3001
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10880
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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