DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-3 and ARID4A

DIOPT Version :9

Sequence 1:NP_523951.1 Gene:msl-3 / 38779 FlyBaseID:FBgn0002775 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_016877049.1 Gene:ARID4A / 5926 HGNCID:9885 Length:1284 Species:Homo sapiens


Alignment Length:451 Identity:75/451 - (16%)
Similarity:153/451 - (33%) Gaps:129/451 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SKARVLY----TSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRATVLL------------ 73
            :|.:|.|    |.|:.....:..|.......|.:|:.||...||..|:|..::            
Human   577 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQ 641

  Fly    74 -------KDTE--ENRQLQRELAEAAKLQIRGDYSYK---GTPDKPSAKKKRGGKAAHVEEPIVV 126
                   :|:|  |.|..:|:.::..:..::...|..   |.....:::.|.|.::|....|...
Human   642 KKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSGTRSARSNIPDSS 706

  Fly   127 PMDTGHLEAEHEMAPTPRAAGNRTRDNSGGKRKEKPPSGDGRLKGNRGRQTETFYNNAIND---- 187
            |:..|                  ..|:.....:.:.......:......:.|...|..:||    
Human   707 PLSNG------------------MEDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLD 753

  Fly   188 ---VSVYNHVPQE-DRIMMRVSERLRELIEYDRNMIKVLGKQHALPARVPIVTIMENF--VKQQA 246
               ..:..|:.:| ||..|:..|.|:..:..:..::::.|.:            ||..  ||::|
Human   754 EENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNK------------MEKTEEVKKEA 806

  Fly   247 VELAISIKQDSSRARNTQSRNARMEREYDRVMSTVCMLKEVVDGLRIYF-------EFHVDDH-- 302
                    :.|.:.:..:|:...:..|..::.|               |       |.|::.|  
Human   807 --------EKSPKGKGRRSKTKDLSLEIIKISS---------------FGQNEAGSEPHIEAHSL 848

  Fly   303 -LLYTEEKEYVHNYLTDDNMRNCSLILNKSYEYINPSGDTELI----GLDGTPVV--EGSGDTNG 360
             |...:.|.:  :..|:|.:..|........:.:..|...:.|    |::.|..|  |.:.|..|
Human   849 ELSSLDNKNF--SSATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIG 911

  Fly   361 QIGVINI-----------GGPEYEKQLQKCLLYIVTASGKNTAQAYERTSPYTAAYKLPVE 410
            ..|:.|:           |.|....:..:|:..:       |::.::  ||......:|::
Human   912 SEGMKNLNFEQHFERENEGMPSLIAESNQCIQQL-------TSERFD--SPAEETVNIPLK 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-3NP_523951.1 MRG 196..486 CDD:283390 42/245 (17%)
ARID4AXP_016877049.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3001
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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