Protein Alignment msl-3 and Arid4a

DIOPT Version :9

• Sequence 1: NP_523951.1
• Gene: msl-3 / 38779
• FlyBaseID: FBgn0002775
• Length: 512
• Species: Drosophila melanogaster
• Sequence 2: XP_038968184.1
• Gene: Arid4a / 314205
• RGDID: 1307442
• Length: 1277
• Species: Rattus norvegicus
• Alignment Length: 676
• Identity: 120/676 - (17%)
• Similarity: 212/676 - (31%)
• Gaps: 258/676 - (38%)

  Fly    25 SKARVLY----TSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRCVRATVLL------------ 73
            :|.:|.|    |.|:.....:..|.......|.:|:.||...||..|:|..::
  Rat   597 TKVKVKYGRGKTQKIYEASIKSTEMDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQ 661

  Fly    74 -------KDTE--ENRQLQRELAEAAKLQIRGDYS------------YKGTPD------------ 105
                   :|:|  |.|..:|:.::..:..::..:|            .:|..|
  Rat   662 KKKVKNKEDSEKDEKRDEERQKSKRGRPPLKSTFSSNMPYSLSKTSNSEGKSDSCSSDSEAEDQL 726

  Fly   106 ---------KPSAKK--------------KRGGKAAHV-----------EEPIVVPMDTG----- 131
                     .|..|:              :...|..|:           .||:.|  :.|
  Rat   727 EKSSVSEELSPDIKEELEKSENVHDDKLAEENPKTVHISNENDRTQAQPSEPLTV--EAGDSDQI 789

  Fly   132 -HL---------EAEHEMAPTPRAAG--NRTRDNSGGKRKEKPPSGDGRLKGNRGRQTETF---- 180
             |:         |.:.::..:|:|.|  |:|:|.|....|..|.|.:......|| .|.:.
  Rat   790 VHIFGDKVEQAEELKKQVEKSPKAKGRRNKTKDLSLELIKISPFSQEEAGSEARG-DTHSLEFSS 853

  Fly   181 -----YNNAINDVSVYNHVPQEDRIMMRVSERLRELIEYDRNMIKVLGKQHALPARVPIVTIMEN 240
                 :::..:||..|    ::::.:.|                |:|| ||:...::.:
  Rat   854 LECKNFSSTEDDVDQY----EKEKKLKR----------------KILG-QHSPEKKLRL------ 891

  Fly   241 FVKQQAVELAISIKQ----DSSRARNTQSRNA--RMEREYDRVMSTVC----------------- 282
               :..||:...:.|    ||:.|...:..:.  |.|.|.:.:.|.:.
  Rat   892 ---ENGVEMTTGLSQERSDDSAVAEGVKGVHVEQRFEAEGEGMPSLIAEPDQGIQEPTGVKPDSP 953

  Fly   283 -------MLKEVVDGL-------RIYFEFHVDDHLLYTEEKEYVHNYLTDDNMRNCSL------- 326
                   .|||..|.:       .:..|..:||  |..:||..:.:.:.:.:..| ||
  Rat   954 AEEPAHTPLKEEEDVMPLIGPETLVCHEVDLDD--LDEKEKPSIEDVVIEGSESN-SLGSVPPAL 1015

  Fly   327 --ILNKSYEYINP---SGDTEL-------IGLDGTPVVEGSGD---------------TNGQIGV 364
              :..:::...:|   |.|...       |.::...:.|.|.:               |:|..|:
  Rat  1016 PPVAQQNFSVASPLTLSQDESRSIKSESDITIEVDSIAEESQEGLCERESANGFEASVTSGACGM 1080

  Fly   365 INIGGPEYEKQLQKCLLYIVTASGKNT---AQAYERTSPYTAAYKLPVEMRGFLNETFKWRLLSA 426
            | :...|..::.||      ..|..|:   |:..:||...|:| ....|..|....:      .:
  Rat  1081 I-VHERESREKGQK------RPSDANSGLMAKKQKRTPKRTSA-AAKSEKNGAGQSS------DS 1131

  Fly   427 ESPPEKSMVFGAPHLVRLMIKMPMFLNASPISNKKLEDLLPHLDAFINYLENHRE---------- 481
            |..|..........:.||.:..|..|..||..      :.||:..  ...|.|||
  Rat  1132 EDLPAMDSSSNCTPVKRLSLPKPQKLPRSPAR------ISPHIKD--GEKEKHREKHPNSSPRTY 1188

  Fly   482 -W------FDRENFVNSTALPQEDLQ 500
             |      .|..|.....:..||.||
  Rat  1189 KWSFQLNELDNMNSTERISFLQEKLQ 1214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msl-3	NP_523951.1	MRG	196..486	CDD:283390	67/380 (18%)
Arid4a	XP_038968184.1	Tudor_ARID4A_rpt1	23..80	CDD:410530
		Tudor_SF	81..137	CDD:413384
		RBB1NT	189..281	CDD:400474
		ARID	331..416	CDD:355778
		CBD_RBP1_like	597..655	CDD:350843	14/57 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3001
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900