DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-3 and Msl3l2

DIOPT Version :9

Sequence 1:NP_523951.1 Gene:msl-3 / 38779 FlyBaseID:FBgn0002775 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001014054.1 Gene:Msl3l2 / 309790 RGDID:1308699 Length:371 Species:Rattus norvegicus


Alignment Length:393 Identity:89/393 - (22%)
Similarity:148/393 - (37%) Gaps:97/393 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GNRTRDNSGGKRKEKPPSGDGRLKGNRGRQTETFYNNAINDVSVYNHVPQEDRIMMRVSE----- 206
            |...:|:..||.:.....|||..|....::.|.......::.:|  .:|..:.:..|:::     
  Rat     5 GCAPKDDGEGKDEGGSDRGDGDPKPKGKKEVEAHTRREADERAV--RIPIPEVLQQRLADDCYYI 67

  Fly   207 -RLRELIEYDRNMIKVLGKQHALPARVPIVTIMENFVKQQAVELAISIKQDSSRARNTQSRNARM 270
             |.|.|:.              ||.:..:..|:|.:|:.      .|....:|..|..|.:.|..
  Rat    68 NRRRRLVR--------------LPCQTNVGAILECYVRH------FSASALASGDRRPQPQRAAP 112

  Fly   271 EREYDRVMSTVCMLKEVVDGLRIYFEFHVDDHLLYTEEK-EYVHNYLTDDNMRNCSLILNKSYEY 334
            ||       :|.:.:|:.|||||.|:..:...|||.:|: :|        .|...|.....:.|.
  Rat   113 ER-------SVGLCREMADGLRITFDHALPLVLLYPQEQAQY--------EMVTSSTFFFPTEER 162

  Fly   335 INPSGDTELIGLDGTPVVEGSGDTNGQIGVINIGGPEYEKQLQKCLLYIVTASGKNTA------- 392
            .:.:|.::.....|....:.|...       .:.||...|: ::.......|..::|.       
  Rat   163 ASDAGRSQEAPWPGPSPPQPSESQ-------AMAGPTAPKR-RRVETDAARAPRRSTRHSTHCHW 219

  Fly   393 QAYERTSP---------YTAAYKLPVE------------------MRGF------LNETFKWRLL 424
            ||.:|.||         :....|.||.                  ..||      :||...|:|:
  Rat   220 QAEDRASPQAKRSVPKLFPHLQKTPVHSTALSPIALTPGKEGSAMFAGFEGTTEEINEILSWKLV 284

  Fly   425 -----SAESPPEKSMVFGAPHLVRLMIKMPMFLNASPISNKKLEDLLPHLDAFINYLENHREWFD 484
                 ....||..|.::||.||:||.:|:|..|.....|.|.|:.||.|||.|:.:|..::..|.
  Rat   285 PDNYPPGHQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHLDLFLRFLAEYQADFF 349

  Fly   485 REN 487
            .|:
  Rat   350 LES 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-3NP_523951.1 MRG 196..486 CDD:283390 77/341 (23%)
Msl3l2NP_001014054.1 MRG 33..356 CDD:399022 81/365 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343661
Domainoid 1 1.000 112 1.000 Domainoid score I6059
eggNOG 1 0.900 - - E1_KOG3001
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4458
OMA 1 1.010 - - QHG47495
OrthoDB 1 1.010 - - D1624495at2759
OrthoFinder 1 1.000 - - FOG0006694
OrthoInspector 1 1.000 - - otm44792
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10880
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4893
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.870

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