DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr65Ea and Lcp1

DIOPT Version :9

Sequence 1:NP_648075.1 Gene:Cpr65Ea / 38773 FlyBaseID:FBgn0035735 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:126 Identity:44/126 - (34%)
Similarity:70/126 - (55%) Gaps:12/126 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYKLLLVVALFGCALAAP-------LNDDTITKFLANQD---TDGTYAYDIEQASGIQIKEEGLA 55
            |:|.:::.|:.|.|:|.|       .::|.....|:..|   .|| :...:..::||:....|.|
  Fly     1 MFKFVMICAVLGLAVANPPVPHSLGRSEDVHADVLSQSDDVRADG-FDSSLHTSNGIEQAASGDA 64

  Fly    56 GHEAHGSYSYISPEGIPVQVVYTADEFGFHPQSNLLPTPPPIPEEILRSIRYIQEH-PTPE 115
            ....||::.:|||||..|:|.|.|:|.|:.|....:||||||||.|.|::.:::.| |.||
  Fly    65 HGNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPE 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr65EaNP_648075.1 Chitin_bind_4 37..84 CDD:306811 16/46 (35%)
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 16/46 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.