DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8641 and rap-1

DIOPT Version :10

Sequence 1:NP_648073.1 Gene:CG8641 / 38771 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_501549.1 Gene:rap-1 / 177709 WormBaseID:WBGene00004307 Length:188 Species:Caenorhabditis elegans


Alignment Length:175 Identity:59/175 - (33%)
Similarity:96/175 - (54%) Gaps:22/175 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 YRLVMLGSSRAGKSSIVARFLGNRFEEAYTPTIEEFHRKLYRIRNEVFQLDILDTSGYHPFPAMR 231
            |::|:|||...|||::..:|:...|.|.|.||||:.:||...:..:...|:||||:|...|.|||
 Worm     4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68

  Fly   232 RLSFLTGDLFILVFSMDSRESFEEVVRLRENILETKWAALNPGSGFKKKSLPKIPMILAGNKCDR 296
            .|....|..|:||:|:.::.:|.:::.||:.||             :.|...::||||.||||| 
 Worm    69 DLYMKNGQGFVLVYSITAQSTFNDLMDLRDQIL-------------RVKDTDEVPMILVGNKCD- 119

  Fly   297 DFKTVQVDEVMGYIAGQDNC----CTFVECSARQNYRIDDLFHSL 337
                ::.:.|:|...||:..    ..|:|.||:....:.::|:.|
 Worm   120 ----LEDERVVGKDQGQNLARQFGSAFLETSAKAKINVSEVFYDL 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8641NP_648073.1 Rhes_like 167..434 CDD:133343 59/175 (34%)
rap-1NP_501549.1 Rap1 3..166 CDD:133375 59/175 (34%)

Return to query results.
Submit another query.