DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8641 and Rasd2

DIOPT Version :9

Sequence 1:NP_001261494.1 Gene:CG8641 / 38771 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_598252.1 Gene:Rasd2 / 171099 RGDID:628594 Length:266 Species:Rattus norvegicus


Alignment Length:270 Identity:127/270 - (47%)
Similarity:175/270 - (64%) Gaps:28/270 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 CDDSLPSAKNCYRLVMLGSSRAGKSSIVARFLGNRFEEAYTPTIEEFHRKLYRIRNEVFQLDILD 220
            |..::| |||.||:|:||:||.||||||:|||..|||:.||||||:||||:|.|..:::||||||
  Rat    10 CTLNVP-AKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHGDMYQLDILD 73

  Fly   221 TSGYHPFPAMRRLSFLTGDLFILVFSMDSRESFEEVVRLRENILETKWAALNPGSGFKKKSLPKI 285
            |||.||||||||||.||||:||||||:||||||:||.||::.|||.|....|     |.|...::
  Rat    74 TSGNHPFPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKN-----KTKEAAEL 133

  Fly   286 PMILAGNKCDRD--FKTVQVDEVMGYIAGQDNCCTFVECSARQNYRIDDLFHSLFTVSNLPLEMT 348
            ||::.|||.|..  .:.|...|....::|.:||..| |.||::|..::::|:.||:::.||.||:
  Rat   134 PMVICGNKNDHSELCRQVPAMEAELLVSGDENCAYF-EVSAKKNTNVNEMFYVLFSMAKLPHEMS 197

  Fly   349 PNHHRRLVSVFG---APSPLPPHGSAVGGTKKNALSIKRRFSDACGVVTPNARRPSIRTDLNLMR 410
            |..|.::...:|   .|.|.....:.|.|              |.|:|:|.|||||:.:||..::
  Rat   198 PALHHKISVQYGDAFHPRPFCMRRTKVAG--------------AYGMVSPFARRPSVNSDLKYIK 248

  Fly   411 SKTMALNEGE 420
            :|  .|.||:
  Rat   249 AK--VLREGQ 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8641NP_001261494.1 Rhes_like 167..434 CDD:133343 122/259 (47%)
RAS 167..338 CDD:214541 94/172 (55%)
Rasd2NP_598252.1 Rhes_like 20..266 CDD:133343 122/259 (47%)
Effector region 48..56 6/7 (86%)
Interaction with GNB1, GNB2 and GNB3. /evidence=ECO:0000250 189..235 15/59 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3176
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I3324
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1398885at2759
OrthoFinder 1 1.000 - - FOG0005519
OrthoInspector 1 1.000 - - otm44460
orthoMCL 1 0.900 - - OOG6_107719
Panther 1 1.100 - - O PTHR46149
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3937
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.