DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and col7a1l

DIOPT Version :9

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:XP_009298585.1 Gene:col7a1l / 559516 ZFINID:ZDB-GENE-030131-9861 Length:2161 Species:Danio rerio


Alignment Length:587 Identity:186/587 - (31%)
Similarity:240/587 - (40%) Gaps:167/587 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 PGQTQYTHERPYRGIKGEKGERGPKGD-SIRGPPGP--------------------PGPPGPKGE 336
            ||:       |.:||.|..|::|.:|| .:.|||||                    ||.||||||
Zfish  1456 PGE-------PAKGILGPPGKKGARGDIGLVGPPGPQGIKGDRGDKGEKGNPGFGIPGQPGPKGE 1513

  Fly   337 TAPYPPFVETTSAGAKYTGECTCNASDILEAIKDNESLRESLRGAPGTPGKDGK---------PG 392
            :.      |..:.|                           |.|.||..|.||.         ||
Zfish  1514 SG------ERGNVG---------------------------LSGKPGPKGNDGSKGDKGEIGLPG 1545

  Fly   393 T---PGHTGATGVPGARGARGSEGAQGLKGEPGVDGLPGVMGPPGPPGPPGLPENYDESLMVNSM 454
            |   ||..|..||||.:|..||.|..|.:||||..|:.|.:|.||.||.||     |:.      
Zfish  1546 TSGSPGLRGKDGVPGLKGDTGSRGEPGSRGEPGDRGVKGPLGLPGRPGDPG-----DKG------ 1599

  Fly   455 GAFRGTTQPGAKGVPGEKGDAGQKGERGDPGH------------------KGAHGPSGAKGEPGE 501
                   :||..|:||.:|..|.|||.|.||.                  ||..|.||..|.|||
Zfish  1600 -------EPGKLGLPGPEGHKGLKGEPGLPGPPGVTQFTTSDNTVLTRAIKGEPGESGLPGPPGE 1657

  Fly   502 PGTPGLPGLPGQVGQPG-----------GLDGLASANGTKGEKGEKGEKGMRGRRGGTGATGPIG 555
            .|.||.||..|:.|.||           |||||....|:|||.|:|||.|.:|.:|..|..|..|
Zfish  1658 TGRPGPPGPEGKPGPPGNSLFGSSTGKDGLDGLPGIPGSKGEAGQKGEPGSKGEKGDHGRAGITG 1722

  Fly   556 PPGKPGPMGDIGHSGRPGMTGPKGEMGPKGPKGDSG--GREGLKGDKGDRGQDGRDGLPGPPGLP 618
            .||.||..|..|..|:.|::|..||.||||.:|:.|  |..|..|::|.:|:.|..||||||.:.
Zfish  1723 MPGLPGTPGKPGVDGKRGVSGKDGERGPKGDEGEKGVKGEPGANGNEGQKGEQGSPGLPGPPIVL 1787

  Fly   619 STGGGDGDSGGVQYIPMPGPPGPPGPPGLPG----LSISGPKGEPGVDSRSSFFGDA----SYYG 675
            ..|....|......:|| ||||..||||:.|    :.:.|.||:.|...|:....|.    ..||
Zfish  1788 QEGMSIEDMKKAFPLPM-GPPGATGPPGMKGEKGEMGLKGEKGDAGAPGRAVEMKDIEGLFDSYG 1851

  Fly   676 --------------RPGARSSLDELKALRELQDLRDRPDGT--AEPPRQPGHSHKH--------- 715
                          :.|....|.|:...|.::..|..||..  .|......:||..         
Zfish  1852 IKLSLLKALIDRLLQDGMEELLHEISTSRRVKGDRRDPDSNIITEYTSSVKYSHPQEPLPDTDLI 1916

  Fly   716 EETLGLVDGEEPYFSASSSNMNMKIVPGAVTFQNI---DEMTKKSALNPPGTLAYITEEEALLVR 777
            ||...|.:|:.|..|..:.. ..:::|...|...:   |:::|...:       .:..||..||.
Zfish  1917 EEESDLEEGQMPEPSPETVG-EPEVLPTVWTISTVRKNDDLSKTKDM-------LVDVEEKKLVE 1973

  Fly   778 VN 779
            .|
Zfish  1974 TN 1975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:304605
Collagen 378..432 CDD:189968 28/65 (43%)
Collagen 464..518 CDD:189968 28/71 (39%)
Collagen 494..615 CDD:189968 60/133 (45%)
Endostatin-like 831..999 CDD:238151
col7a1lXP_009298585.1 vWFA 33..198 CDD:294047
FN3 236..327 CDD:238020
fn3 330..410 CDD:278470
fn3 422..487 CDD:278470
fn3 509..581 CDD:278470
fn3 604..678 CDD:278470
FN3 698..781 CDD:238020
fn3 785..862 CDD:278470
vWFA 954..1118 CDD:294047
Collagen 1208..1265 CDD:189968
Collagen 1316..1371 CDD:189968
Collagen 1403..1459 CDD:189968 2/9 (22%)
Collagen 1439..1500 CDD:189968 15/50 (30%)
Collagen 1503..1560 CDD:189968 25/89 (28%)
Collagen 1542..1601 CDD:189968 29/76 (38%)
Collagen 1683..1739 CDD:189968 26/55 (47%)
Collagen 1722..1784 CDD:189968 28/61 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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