DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and col15a1b

DIOPT Version :9

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:XP_009296788.1 Gene:col15a1b / 558137 ZFINID:ZDB-GENE-070912-689 Length:1315 Species:Danio rerio


Alignment Length:1256 Identity:385/1256 - (30%)
Similarity:514/1256 - (40%) Gaps:342/1256 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LTDIMNNNQFAGIEFGEAEDGFPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYL 104
            |||::.......:.|....:|:||:.|...|:|....:..:||..: :|||::|.:.||.:||.|
Zfish    93 LTDLVGMPLPPSVSFITGYEGYPAYSFGPHANVGRLTQSFVPEPFFTDFAIIVTVKPSSSRGGVL 157

  Fly   105 FSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDK 169
            |::.:|..|:||||:.|:||...:..:.|.|::.......::|||.|..:..:|:...|.|...:
Zfish   158 FAITDPSQTIVQLGLALTPVEDQTQRIVLYYSEPRSANSAEVASFKVPDMTQQWSRFTLSVERQE 222

  Fly   170 VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVTCMP 234
            |..|.||:..:.....|....|.|...|.:::..|||....:|.|.::::.:           .|
Zfish   223 VRLYMDCDEYHIAPFKRSQQPLSFKPGSGIFVANAGSTGLERFVGSIQQLVI-----------KP 276

  Fly   235 PPKATIAPTTADDGSIFYEG--SGENILFEDSTEANILSDDFWNTGDEATDIFDASGMQPP---- 293
            .|:|.......||.|:...|  ||:.. ::|..|.....:.|..|.::...:...|.::.|    
Zfish   277 DPRAAEEQCEEDDPSLQASGDRSGDGD-YDDEEEHARREETFGQTNNKEKTLRPTSPVEAPPIQS 340

  Fly   294 ---------GQTQYTHERPYRGI---------KGEKGERGPKGDSIRGPPGPPGPPGPK------ 334
                     |......||..||.         .|:|||||..|.:  ||||||||||..      
Zfish   341 PDIEEGGFSGHVTPIDERLLRGTYKTDETGERVGQKGERGEPGPA--GPPGPPGPPGTSVPIRHS 403

  Fly   335 ---GETAPYPPFVETTSAGAKYTGECTCNASDILEAIKDNESLRESLRGAPGTPGKDGKPGTPGH 396
               |...|..|..:....|                        |....|.||:.|:|||||..|.
Zfish   404 GQPGPRGPQGPIGQPGGRG------------------------RPGKDGQPGSKGEDGKPGQRGQ 444

  Fly   397 TGATGVPGARGARGSEGAQG--------------------------------------------L 417
            ||..|:||..|.:|.:|..|                                            |
Zfish   445 TGPPGLPGESGVKGEKGDPGVGRTGLPGPPGPPGPPGPSKPVKVPYGFDALGSGFGDADIDTELL 509

  Fly   418 KGEPGVDGLPGVMGPPGP--------PGPPGLP--ENYD----------ESLMVNSMGAFRGTTQ 462
            :|.||..|.||:.|||||        |||||.|  :..|          :..:....|......:
Zfish   510 RGPPGPPGPPGIPGPPGPNSPLGGLLPGPPGAPGKDGRDGQSGLPGVPGQDGLPGQQGPKGAKGE 574

  Fly   463 PGAKGVPGEKGDAGQKGERGDPGHKGAHGPSGAKGEPGEP------------------------- 502
            .|.:|.||.||:.|..|:||.||..|..||.|..|.||.|                         
Zfish   575 HGIRGPPGPKGENGDPGQRGPPGPFGTMGPRGLPGPPGPPGPPGPINNNFMVDTLKDFEGSGESG 639

  Fly   503 ------------GTPGLPGLPGQVGQPG----------------------GLDGLASANGTKGEK 533
                        |.|||||.||..|.||                      ||.||..|.|.||:|
Zfish   640 SFLGTGILKGYQGPPGLPGPPGPQGPPGANGPPGLSVKGERGSPGPDGIHGLAGLPGARGPKGDK 704

  Fly   534 GEKGEKGMRGRRG--GTGATGPIGPPGK------------------------PGPMGDIGHSGR- 571
            |..||||.|||.|  .||..||.||||.                        |||||..|..|| 
Zfish   705 GNPGEKGERGRDGLNITGPPGPPGPPGPIINFQDLFLNDTAAKLNLTKIRGLPGPMGPEGLPGRA 769

  Fly   572 --PGMTGPKGEM------GPKGPKGDSG-----------------GREGLKGDKGDRGQDGRDGL 611
              ||..|||||:      ||.|.|||.|                 |..|.||.|||.|..|..|:
Zfish   770 GFPGPRGPKGEIGFPGVQGPPGLKGDKGEPGVSIAADGSIITSLRGPRGPKGTKGDIGLAGPHGI 834

  Fly   612 PGP---------------PGLPSTGGGDGDSGGVQYIPM--PGPPGPPGPPGL------------ 647
            |||               ||.|...|..||.|.... |.  |||||||||||.            
Zfish   835 PGPIGPPGLKGGYGIPGRPGRPGIAGRKGDKGDASG-PSGPPGPPGPPGPPGRVIGLNGTVFPVP 898

  Fly   648 ---------------------------PGLS-------ISGPKGEPGVDSRSSFFGDASYYGRPG 678
                                       ||||       ..||||:.|.:.:....||....|.||
Zfish   899 PRPHCKTPVNNNNSQQGVKGEKGDEGNPGLSGTPVPHAYVGPKGDNGYNGQKGEKGDPGLPGPPG 963

  Fly   679 --ARSSLDELKALRELQDLRDRP--DGTAEPPRQPGHSHKHEETLGLVDGEEPYFSASSSNMNMK 739
              .|:.|...|.    :.:...|  .|...||..||:.....:......|.....|..||..::.
Zfish   964 LPGRTGLVGPKG----ESIVGPPGDTGAPGPPGLPGYGSPGPQGPPGAPGPPGTSSLYSSAASLP 1024

  Fly   740 IVPG-------------AVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLV 791
            ..||             ..|::|...:.::|:....||:.|:.::..|.:||..||:.|.||.|:
Zfish  1025 GPPGPPGPPGAPGYGNPVSTYKNSQTLMRESSQAAEGTMGYVIDKSELYIRVRGGWKKIELGELI 1089

  Fly   792 PIATPAPPTTVA-----PSMRF--DLQSKNLLNSPP--PLLNTPTWYPRMLRVAALNEPSTGDLQ 847
            |:...:..:.::     ||.|.  .:.|:.|.:..|  .||...|.....|.:.|||.|.:||:.
Zfish  1090 PVPEDSSSSALSQGLSRPSDRSVPRVHSQELKSFLPGYNLLPDTTHSMPALHLVALNAPFSGDMH 1154

  Fly   848 GIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIFNG 911
            ||||||:.||:|.|..||..|::|||||.:|:|.|||:.||| :|||||.:|:|||:||..:|:|
Zfish  1155 GIRGADYQCYQQARARGLTSTYRAFLSSHLQDLSTIVKKADRFNLPVVNLKGEVLFSSWMAMFSG 1219

  Fly   912 QGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDG 976
            .||.|.....||||.|:||:||..|..|:|||||...|.|....||:||.:||......||.|..
Zfish  1220 NGGVFDPLTPIYSFDGRNVLTDQAWSQKLVWHGSSTVGIRMTTNYCEAWRTGDMAVTGQASLLQT 1284

  Fly   977 HKLLEQKRQSCDSKLIILCVE 997
            .:||.|..:||.:..||||:|
Zfish  1285 GRLLGQHTRSCSNHFIILCIE 1305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:304605 49/164 (30%)
Collagen 378..432 CDD:189968 26/97 (27%)
Collagen 464..518 CDD:189968 29/90 (32%)
Collagen 494..615 CDD:189968 77/246 (31%)
Endostatin-like 831..999 CDD:238151 86/168 (51%)
col15a1bXP_009296788.1 LamG 99..278 CDD:304605 51/189 (27%)
Collagen 404..463 CDD:189968 23/82 (28%)
Collagen 546..600 CDD:189968 14/53 (26%)
Collagen <677..717 CDD:189968 17/39 (44%)
Collagen 754..800 CDD:189968 22/45 (49%)
Endostatin-like 1138..1307 CDD:238151 86/168 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3518
eggNOG 1 0.900 - - E1_KOG3546
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1396
Inparanoid 1 1.050 422 1.000 Inparanoid score I1759
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362001at2759
OrthoFinder 1 1.000 - - FOG0002295
OrthoInspector 1 1.000 - - otm26417
orthoMCL 1 0.900 - - OOG6_106129
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1979
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.730

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