| Sequence 1: | NP_001246651.1 | Gene: | Mp / 38769 | FlyBaseID: | FBgn0260660 | Length: | 1039 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038937496.1 | Gene: | Col6a4 / 315981 | RGDID: | 1564060 | Length: | 2327 | Species: | Rattus norvegicus |
| Alignment Length: | 395 | Identity: | 136/395 - (34%) |
|---|---|---|---|
| Similarity: | 158/395 - (40%) | Gaps: | 107/395 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 306 GIKGEKGERGPKGDSIRGPPGPPGPPGPKGETAPYPPFVETTSAGAKYTGECTCNASDILEAIKD 370
Fly 371 NESLRESLRGAPGTPGKDGKPGTPGHTGATGVPGARGARGSEGAQGLKGEPGVDGLPGVMGPPGP 435
Fly 436 PGPPGLPENYDESLMVNSMGAFRGTTQPGAKGVPGEKGDAGQKGERGDPGHKG----AHGPSGAK 496
Fly 497 GEPGEPGTPGLPGLPGQVGQPG-----GLDGLASANGTKGEKGEKGEKGMRGRRGGTGATGPIGP 556
Fly 557 PGKPGPMGDIGHSGRPGMTGPKGEMGPKGPKGDSG-----GREGLKGDKGDRGQDGRDGL----- 611
Fly 612 ---------PGPPGLPSTGGGDGDSG--------GVQ-------YIPMPGPPGPPGPPGLPGLSI 652
Fly 653 SGPKG 657 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Mp | NP_001246651.1 | LamG | 58..222 | CDD:304605 | |
| Collagen | 378..432 | CDD:189968 | 24/53 (45%) | ||
| Collagen | 464..518 | CDD:189968 | 24/57 (42%) | ||
| Collagen | 494..615 | CDD:189968 | 57/144 (40%) | ||
| Endostatin-like | 831..999 | CDD:238151 | |||
| Col6a4 | XP_038937496.1 | vWFA | 34..196 | CDD:412136 | |
| vWA_collagen | 234..399 | CDD:238749 | |||
| vWFA | 429..580 | CDD:412136 | |||
| vWFA | 633..801 | CDD:412136 | |||
| vWA_collagen | 868..1024 | CDD:238749 | |||
| VWA | 1050..1219 | CDD:395045 | |||
| Collagen | 1432..1487 | CDD:396114 | 23/89 (26%) | ||
| Collagen | 1465..1519 | CDD:396114 | 25/89 (28%) | ||
| Collagen | 1501..1555 | CDD:396114 | 26/77 (34%) | ||
| Collagen | 1583..1638 | CDD:396114 | 21/54 (39%) | ||
| Collagen | 1616..1687 | CDD:396114 | 30/70 (43%) | ||
| Collagen | 1670..1732 | CDD:396114 | 20/61 (33%) | ||
| Collagen | 1708..1763 | CDD:396114 | 18/56 (32%) | ||
| VWA | 1798..1945 | CDD:395045 | |||
| vWFA_subfamily_ECM | 2002..2184 | CDD:238727 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3546 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||