DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and Col14a1

DIOPT Version :9

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001124020.1 Gene:Col14a1 / 314981 RGDID:1305806 Length:1794 Species:Rattus norvegicus


Alignment Length:742 Identity:194/742 - (26%)
Similarity:254/742 - (34%) Gaps:297/742 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 FAGIEFGEAEDG----FPAFRFLQTADVKSPYRMLLPEKL-YEFAILITFR---QSSLKGGYLFS 106
            |:.:|....|.|    ||.::..:.|.|..|.:.|.||.| .::.:...||   .:..:...|:.
  Rat  1241 FSAVEGVSMEPGTFNLFPCYQIHKDALVSQPTKYLHPEGLPADYTMTFLFRILPDTPQEPFALWE 1305

  Fly   107 VVN----PLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG------RKL--ASFGVAHVPDKWN 159
            ::|    ||     :|:.|....|.....|..||...|.:.      ||:  .||...||     
  Rat  1306 ILNKKSEPL-----VGIILDNGGKTLTYFSYDYTGDFQTVTFEGPDIRKMFYGSFHKLHV----- 1360

  Fly   160 SIALQVLSDKVSFYYDCE------LRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEK 218
             :..:.|:..|   .||:      :..:..:|.:.:|::            |.::..:       
  Rat  1361 -VVSKTLAKVV---VDCKEVGQKAINASANITSDGVEVL------------GRMVRSR------- 1402

  Fly   219 INVYGNPDAINVTCMPPPKATIAPTTADDGSIFYEGSGENILFEDSTEANILSDDFWNTGDEATD 283
                            .|....||....             :|:      |:....|.:.|...:
  Rat  1403 ----------------GPNGNSAPFQLQ-------------MFD------IVCSTSWASKDRCCE 1432

  Fly   284 IFDASGMQPPG-----------------QTQYTHERPYRGIKGEKGERGPKGDSIRGPPGPPGPP 331
            :        ||                 :|......| .|..|..|.|||||.  :|.|||.||.
  Rat  1433 L--------PGLRDEESCPDLPRSCSCSETNEVALGP-AGPPGGPGLRGPKGQ--QGEPGPKGPE 1486

  Fly   332 GPKGETAPY----PPFVETTSAGAKYTGECTCNASDILEAIKDNESLRESLRGAPGTPGKDGKPG 392
            ||:|||.|.    ||..:..|.                          .|::|.||.||..|..|
  Rat  1487 GPRGETGPAGPQGPPGPQGPSG--------------------------LSIQGMPGMPGDKGDKG 1525

  Fly   393 TPGHTGATGVPGARGARGSEGAQGLKGEPGVDGLPGVMGPPGPPGPPGLPENYDESLMVNSMGAF 457
            ..|..|..||||..|:.|.:|:.|.:|.||.|   |..||||||||.|:                
  Rat  1526 DAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKD---GSSGPPGPPGPIGI---------------- 1571

  Fly   458 RGTTQPGAKGVPGEKGDAGQKGERGDPGHKGAHGPSGAKGE------------------------ 498
                 |||.||||..|..|.:|..|.||..||.|..|.:|:                        
  Rat  1572 -----PGAPGVPGIAGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRAVARQVCEQLIQSHMA 1631

  Fly   499 ----------------------PGEPGTPGLPGLPGQVGQPG--GLDGLASANGTKGEKGEKGEK 539
                                  |||||.||.||.||:.|.||  |..|.|...||.||:|..|.|
  Rat  1632 RYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPGEQGPPGAPGFPGNAGVPGTPGERGLTGVK 1696

  Fly   540 GMRGRRGGTGATGPIGPPGKPGPMGDIGHSGRPGMTGPKGEMGPKGPKGDSGGREGLKGDKGDRG 604
            |.:| ..|.|..||.|||                        ||.||.|:|              
  Rat  1697 GDKG-NPGIGTQGPRGPP------------------------GPAGPSGES-------------- 1722

  Fly   605 QDGRDGLPGPPGLPSTGGGDGDSGGVQYIPMPGPPGPPGPPGLPGLSISGPKGEPGVDSRSSFFG 669
               |.|.|||||                  .|||.||||..|:||  ..||.|:||....||   
  Rat  1723 ---RPGSPGPPG------------------SPGPRGPPGHLGVPG--PQGPSGQPGYCDPSS--- 1761

  Fly   670 DASYYG-------RPGARSSLDELKAL 689
             .|.||       :|......||.:||
  Rat  1762 -CSAYGVGVSHPDQPEFTPVQDEQEAL 1787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:304605 37/189 (20%)
Collagen 378..432 CDD:189968 22/53 (42%)
Collagen 464..518 CDD:189968 29/99 (29%)
Collagen 494..615 CDD:189968 45/168 (27%)
Endostatin-like 831..999 CDD:238151
Col14a1NP_001124020.1 FN3 32..112 CDD:238020
vWA_collagen_alphaI-XII-like 158..321 CDD:238759
fn3 355..433 CDD:394996
FN3 448..517 CDD:214495
FN3 538..622 CDD:238020
FN3 631..702 CDD:214495
FN3 740..824 CDD:238020
fn3 830..906 CDD:394996
FN3 920..995 CDD:419708
vWA_collagen_alphaI-XII-like 1029..1193 CDD:238759
TSPN 1227..1422 CDD:214560 44/248 (18%)
Collagen 1478..1602 CDD:396114 63/173 (36%)
Collagen <1681..1755 CDD:396114 43/135 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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