DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and lon-3

DIOPT Version :10

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_506061.1 Gene:lon-3 / 179673 WormBaseID:WBGene00003057 Length:324 Species:Caenorhabditis elegans


Alignment Length:391 Identity:113/391 - (28%)
Similarity:145/391 - (37%) Gaps:125/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 TTADDGSIFYEGSGENILFEDSTEANILS--DDFWNTGDEATDIF---------DASGMQPPGQT 296
            |||..|::.:  ||.::|......|:|.|  ...|...|...|.|         |...:.....:
 Worm     4 TTATSGALIF--SGASLLVSLFAAASIYSQVSSIWTELDNEIDSFKLLTNDIWGDMINLGAGSAS 66

  Fly   297 QYTHERPYRGIKGEKGERGPKGDSIRGPPGPPGPPGPKGETAPYP----PFVETTSAGAKYTGEC 357
            .....:.|.|. |..|...|:            |..|:|:..|.|    ||....|.|   :..|
 Worm    67 NRIRRQAYGGY-GATGTNAPE------------PQFPQGDKGPLPVPGLPFGPNVSGG---SDRC 115

  Fly   358 TCNASDILEAIKDNESLRESLRGAPGTPGKDGKPGTPGHTGATGVPGARGARGSEGAQGLKGEPG 422
            .|                                 |..:|..||..|..|.:|.:|..|:.|.||
 Worm   116 QC---------------------------------TVENTCPTGPDGEEGEQGPDGQDGVDGVPG 147

  Fly   423 VDG--LPGVMGPPGPPGPPGLPENYDESLMVNSMGAFRGTTQPGAKGVPGEKGDAGQKGERGDPG 485
            .||  .|.|...|                   |.|.|   |.|  :|:||.:|..|..|.|    
 Worm   148 FDGQDCPDVEQQP-------------------SQGCF---TCP--QGLPGPQGSQGAPGIR---- 184

  Fly   486 HKGAHGPSGAKGEPGEPGTPGLPGLPGQVGQPG--GLDGLASANGTKGEKGEK--GEKGMRGRRG 546
                 |..||:|:||.||..|.||:||::|..|  |.||...|:|.||:..||  |.:|.||:.|
 Worm   185 -----GMRGARGQPGYPGRDGQPGMPGEMGPTGAPGDDGAPGASGMKGDDAEKPVGRQGQRGQPG 244

  Fly   547 GTGATGPIGPPGK------PGPMGDIGHSGRPGMTGPKGEMGPKGPKG--------------DSG 591
            ..|..|..||.||      ||..|::|..|..|..||.||.||:||.|              |.|
 Worm   245 EQGPDGEEGPAGKDAFEGPPGVEGEVGVPGYQGSAGPDGEEGPRGPSGLPGKDAEYCKCPTRDDG 309

  Fly   592 G 592
            |
 Worm   310 G 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:473984
gly_rich_SclB <292..>421 CDD:468478 26/132 (20%)
gly_rich_SclB <379..>616 CDD:468478 82/240 (34%)
Collagen_trimer 744..792 CDD:466257
Endostatin-like 831..999 CDD:238151
lon-3NP_506061.1 Col_cuticle_N 5..57 CDD:198156 13/53 (25%)
gly_rich_SclB <124..>297 CDD:468478 77/205 (38%)
Blue background indicates that the domain is not in the aligned region.

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