DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and dpy-17

DIOPT Version :10

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_498086.1 Gene:dpy-17 / 175696 WormBaseID:WBGene00001076 Length:352 Species:Caenorhabditis elegans


Alignment Length:393 Identity:112/393 - (28%)
Similarity:140/393 - (35%) Gaps:127/393 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 DEATDIFDASGMQPPGQTQYTHERPYRGIKGEKGERGPKGDSIRGPPGPPGPPGPKG-------- 335
            ||.|...:|..::  ....|...:.:..::.:.|..|..|....||.||.||.||.|        
 Worm    36 DELTTEMEAWRLE--SDQIYMDMQKFGRVRRQAGGYGGYGGYGSGPSGPSGPSGPHGGFPGGPQG 98

  Fly   336 -----------ETAP----YPPFVETTSAGAKYT----------GECTCNASDILEAIKDNESLR 375
                       .|.|    .||.|.....|:...          .:|.||..:...|        
 Worm    99 HFPGNTGSSNTPTLPGVIGVPPSVTGHPGGSPINPDGSPSAGPGDKCNCNTENSCPA-------- 155

  Fly   376 ESLRGAPGTPGKDGKPGTPGHTGATGVPGARGARGSEGAQGLKGEPGVDGLPGVMGPPGPPGPPG 440
                      |..|..|||||.|..|:||..|..|.:...........||.  ...|.||.||||
 Worm   156 ----------GPAGPKGTPGHDGPDGIPGVPGVDGEDADDAKAQTQQYDGC--FTCPAGPQGPPG 208

  Fly   441 LPENYDESLMVNSMGAFRGTTQPGAKGVPGEKGDAGQKGERGDPGHKGAHGPSGAKGEPGEPGTP 505
                        |.|      :|||:|:.|.:|.|...|..|.||..|:.||.|..|..||.|..
 Worm   209 ------------SQG------KPGARGMRGARGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPT 255

  Fly   506 GLPG--LPGQVGQPGGLDGLASANGTKGEKGEKGEKGMRGRRGGTGATGPIGPPGKPGPMGDIGH 568
            |.||  :..|:|.||       |.||.|..||.|::|.:|.||.||..||               
 Worm   256 GEPGADVEHQIGLPG-------AKGTPGAPGESGDQGEQGDRGATGIAGP--------------- 298

  Fly   569 SGRPGMTGPKGEMGPKGPKGDSGGREGLKGDKGDRGQDGRDGLPGPPGLPSTGGGDGDSGGVQYI 633
               ||..||:||.|..||.|.:|.    .|::|:.|||                       .||.
 Worm   299 ---PGERGPQGEKGDDGPNGAAGS----PGEEGEPGQD-----------------------AQYC 333

  Fly   634 PMP 636
            |.|
 Worm   334 PCP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:473984
gly_rich_SclB <292..>421 CDD:468478 36/161 (22%)
gly_rich_SclB <379..>616 CDD:468478 81/238 (34%)
Collagen_trimer 744..792 CDD:466257
Endostatin-like 831..999 CDD:238151
dpy-17NP_498086.1 Col_cuticle_N 4..56 CDD:198156 5/21 (24%)
gly_rich_SclB <154..>331 CDD:468478 82/266 (31%)
Blue background indicates that the domain is not in the aligned region.

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