DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mp and COL7A1

DIOPT Version :9

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_000085.1 Gene:COL7A1 / 1294 HGNCID:2214 Length:2944 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:304605
Collagen 378..432 CDD:189968
Collagen 464..518 CDD:189968
Collagen 494..615 CDD:189968
Endostatin-like 831..999 CDD:238151
COL7A1NP_000085.1 Nonhelical region (NC1) 17..1253
vWA_collagen_alphaI-XII-like 37..201 CDD:238759
fn3 233..317 CDD:278470
fn3 333..407 CDD:278470
fn3 426..487 CDD:278470
fn3 509..587 CDD:278470
FN3 598..680 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..651
FN3 687..771 CDD:238020
fn3 779..855 CDD:278470
FN3 867..952 CDD:238020
FN3 955..1044 CDD:238020
VWA 1054..1227 CDD:278519
Cell attachment site. /evidence=ECO:0000255 1170..1172
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1239..1941
Triple-helical region 1254..2784
Interrupted collagenous region 1254..1477
Collagen 1299..1353 CDD:189968
Cell attachment site. /evidence=ECO:0000255 1334..1336
Collagen 1451..1504 CDD:189968
Collagen 1764..1816 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1963..2782
Cell attachment site. /evidence=ECO:0000255 2008..2010
Collagen 2022..2074 CDD:189968
Collagen 2108..2166 CDD:189968
Collagen 2242..2301 CDD:189968
Collagen 2324..2369 CDD:189968
Collagen 2466..2520 CDD:189968
Collagen 2527..2598 CDD:189968
Cell attachment site. /evidence=ECO:0000255 2553..2555
Collagen 2614..2673 CDD:189968
Collagen 2650..2707 CDD:189968
Nonhelical region (NC2) 2785..2944
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2837..2872
KU 2874..2930 CDD:238057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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