DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mp and COL6A3

DIOPT Version :9

Sequence 1:NP_001246651.1 Gene:Mp / 38769 FlyBaseID:FBgn0260660 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_004360.2 Gene:COL6A3 / 1293 HGNCID:2213 Length:3177 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpNP_001246651.1 LamG 58..222 CDD:304605
Collagen 378..432 CDD:189968
Collagen 464..518 CDD:189968
Collagen 494..615 CDD:189968
Endostatin-like 831..999 CDD:238151
COL6A3NP_004360.2 Nonhelical region 26..2038
vWFA 38..203 CDD:320736
vWFA 241..405 CDD:320736
vWA_collagen_alpha3-VI-like 444..608 CDD:238758
vWA_collagen_alpha3-VI-like 638..802 CDD:238758
vWFA 836..999 CDD:320736
vWFA 1028..1191 CDD:320736
vWA_collagen_alpha3-VI-like 1232..1394 CDD:238758
vWA_collagen_alpha3-VI-like 1435..1599 CDD:238758
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1612..1634
VWA 1639..1811 CDD:306576
VWA 1838..1994 CDD:214621
Triple-helical region 2039..2375
Cell attachment site 2040..2042
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2041..2369
Collagen 2080..2133 CDD:189968
Collagen 2110..2172 CDD:189968
Cell attachment site 2136..2138
Cell attachment site 2148..2150
Cell attachment site 2154..2156
Collagen 2183..2292 CDD:189968
Collagen 2270..2338 CDD:189968
Collagen 2314..2371 CDD:189968
Cell attachment site 2370..2372
Nonhelical region 2376..3177
VWA 2403..2580 CDD:306576
VWA 2619..2806 CDD:306576
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2859..2890
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2957..2986
FN3 2993..3061 CDD:214495
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3073..3093
Kunitz_BPTI 3111..3162 CDD:278443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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