DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and HCM1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_009991.2 Gene:HCM1 / 850429 SGDID:S000000661 Length:564 Species:Saccharomyces cerevisiae


Alignment Length:543 Identity:115/543 - (21%)
Similarity:196/543 - (36%) Gaps:180/543 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NNTILSANDYQLLTSQEQAGQQQPQQL--PAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNY 250
            :|:.|:.....|||..::..:.:.:.:  |:..::.:     |..::..||..:|..|..|:   
Yeast    12 HNSFLTEKSTVLLTQAKRTLEDEKEMITPPSSTVRKT-----MKEVNKRPSHPLSPDHSSPI--- 68

  Fly   251 SSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALS 315
                 :|:|:              :.:.|.:.....|..:.::...:.:..:.:| ...:||..|
Yeast    69 -----APSKA--------------KRQRSDTCARSNGNLTLEEILQSLERRRING-ELAKKPPYS 113

  Fly   316 YINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGK 380
            |..:|..||.:|..||||||:||.::...:.:::.....|:||:|||||||:.|.|..|..    
Yeast   114 YATLICLAILQSQEGKLTLSQIYHWIHVHFPYYKQKDASWQNSIRHNLSLNDAFIKTEKSC---- 174

  Fly   381 PGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASP 445
            .|||::|.:                     |...:.|.:.|...||  ....|:..|.|.|:   
Yeast   175 DGKGHFWEV---------------------RPGAETKFFKGENRGY--EFVKDSLQDIGKYF--- 213

  Fly   446 AFASYDYSAAGATGVSPAGGQGFAD-PWNAHAAHSGS-SSVGVGMGVGP---------LPQY-TN 498
               ..|.:......|.  .|:|..| |.......:|. .|:.:.:...|         :||. |:
Yeast   214 ---EIDSTLDELEQVE--SGEGNDDLPDEEEREEAGKFPSIEIQLNSSPILRVSQLHHIPQLKTD 273

  Fly   499 ISCLAAGGNV------------NGSATTPPLA----HSALGMAPSASSSSS-------------- 533
            .|.|....|:            |..:..||..    |::||: ||..::..              
Yeast   274 NSVLNPHENLESMRNMIENDVNNIDSLEPPYVMKKYHTSLGL-PSLVNAKDHFQAGVKNNNITQA 337

  Fly   534 ------PLGAAATLQS-------------DYAPTASLVAAGYSYATSAGSLDNGL--RSISLQQL 577
                  |:.:|.:.|:             |.:|..|.|        .||||.:.|  ..:.|...
Yeast   338 NRFNTLPITSAKSPQNFRKYFTSFNSNFEDLSPLRSNV--------GAGSLLDPLPYSPLKLYDQ 394

  Fly   578 PGLSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGID--- 639
            ..|:.:...|:|                            |::..|...||||    |||.|   
Yeast   395 KNLALMSKPQSQ----------------------------QSYSNSQLPPPPS----SHGSDLLK 427

  Fly   640 -----HSP-IDRKPAYLPPISPP 656
                 ||. :::.|:.|  ||.|
Yeast   428 TPKMRHSDGLEKTPSRL--ISTP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 33/87 (38%)
HCM1NP_009991.2 COG5025 20..564 CDD:227358 113/535 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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