DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxc1b

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_571804.1 Gene:foxc1b / 79375 ZFINID:ZDB-GENE-010302-2 Length:433 Species:Danio rerio


Alignment Length:465 Identity:117/465 - (25%)
Similarity:172/465 - (36%) Gaps:114/465 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 YSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVG----------------TGGSSQQDAPSTP 298
            |..||.||.    |.....|.........:|....|                .||.::...|..|
Zfish     5 YPVSSQSPL----GVVPYIPGDQGFYRTATGGGYTGMPAPMSMYSHATHEQYPGGMARAYGPYAP 65

  Fly   299 DTTKKSGTRRPE---KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVR 360
                   .::|:   ||..|||.:|..||:.|...|:||:.||.::.:.:.|:|....||:||:|
Zfish    66 -------AQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQNSIR 123

  Fly   361 HNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKI---------KV 416
            |||||||||.|:|:  ...|||||:|||:|.:|.::||:...||||.|..:..:         :.
Zfish   124 HNLSLNECFVKVPR--DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVLREKEDRDRQG 186

  Fly   417 KPYAGHA---NGYYASGYGDAGMDNG----NYYASPAFA------SYDYSAAGATGVSPAGGQGF 468
            |...|.|   :........|...:||    .:.::|..:      |.|.|...|...||      
Zfish   187 KDNPGQACEQDAQQPVKLRDIKTENGACTPPHDSTPPLSTVPKTESPDRSGGSACSGSP------ 245

  Fly   469 ADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSS 533
                .:.......|...:..|:...||:               |...|.:.:||..:.|.:.|.:
Zfish   246 ----QSQTPQQAFSMDTIMTGLRGSPQH---------------AAELPASRAALPGSVSLTYSPT 291

  Fly   534 PLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLP------GLSSIQHAQAQAQA 592
            |..|      .|:|.....|. |.....|.||..|.|......||      ..|||.|.. |:.:
Zfish   292 PQPA------HYSPPCGQPAT-YHCNMQATSLYTGDRGHGDDTLPEYTNTTNASSISHPH-QSSS 348

  Fly   593 QAHHHHHQHH----------------ASHPSHSHQGHG--SMHQNHGTSSTTPPPSQSGGSHGID 639
            |...|..|:.                ||:|......|.  .|.:....:..:.|.:   ||:...
Zfish   349 QESQHLQQNRLAPWYLNQSGELGHLSASYPGQQQNFHAVREMFETQRIALNSSPVT---GSNSCQ 410

  Fly   640 HSPIDRKPAY 649
            .:....:|.|
Zfish   411 MAFPSSQPLY 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 43/87 (49%)
foxc1bNP_571804.1 Forkhead 74..160 CDD:278670 43/87 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..250 13/85 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..355 11/37 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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