DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxp4

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001070655.1 Gene:foxp4 / 768088 XenbaseID:XB-GENE-982692 Length:645 Species:Xenopus tropicalis


Alignment Length:501 Identity:118/501 - (23%)
Similarity:190/501 - (37%) Gaps:112/501 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 QHYSLSALHS-MGTPPASSSP--IPPYGVLMTAHSAGSASPQSNSKTPTDLPQDL--QYASSSTS 161
            |..:|..|.| .|..|..|.|  :.|..:........|...:|:.:...||...:  .:.:|..|
 Frog   186 QRQNLVGLQSGQGPLPIQSLPQAVSPSDLQQLLKEMSSNQEESSKQDTVDLTTSITTSFPNSKVS 250

  Fly   162 TAKVQP-----LQVQLQPLNHQYASTIKY-------------CSN--------NTILSANDYQLL 200
            ...:.|     ...:...::|..:|...|             |.:        ||..:.:|..  
 Frog   251 LPTIHPSLPNGQNTRRDSMSHYESSHPLYGHGECRWPGCEALCEDMGQFIKHLNTEHALDDRS-- 313

  Fly   201 TSQEQAGQQQPQQLPAQQLQHSPG-GGYMSRISTSPSQVISNAHGMPVLNYSSSSS----SPAKS 260
            |:|.:...|..|||..|..:.|.. ...|:.:...||:  ......| ||..||:|    ||...
 Frog   314 TAQCRVQMQVVQQLEIQLAKESERLQAMMTHLHMRPSE--PKPFSQP-LNLVSSASHNKMSPDTF 375

  Fly   261 LNGSESSPPSQ-------NHLENKVSGSAVVGTGGSSQQ--DAPSTPDTTKKSGTRR-----PEK 311
            .:|....|.|.       ....:.:|.|::...|...::  |..|||.:::.:....     ..:
 Frog   376 PDGLPQPPTSATAPITPLRQGTSVISSSSLPSVGPVRRRIVDKFSTPISSELAQNHEFYKNAEVR 440

  Fly   312 PALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGM 376
            |..:|.::|..||.::|..:|||:|||.:..:.:.:||.....|||:|||||||::||.::    
 Frog   441 PPFTYASLIRQAILDTPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRV---- 501

  Fly   377 GVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNY 441
               :..||..||:||.       |...||.|:...|...||        ...||.|.:.: |.:|
 Frog   502 ---ENVKGAVWTVDEL-------EYQKRRPPKMTGSPTLVK--------NMISGLGYSAL-NASY 547

  Fly   442 YASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGG 506
            .|:.|.:|:..                   .|:...|:.|.||..|       .:.:::.....|
 Frog   548 QAALAESSFPL-------------------LNSPPLHNSSGSVLHG-------GHDDVTSTGEPG 586

  Fly   507 NVNGSA--TTPPLAHSALGMAPSA------SSSSSPLGAAATLQSD 544
            |.|||:  .:|..:.|.......|      :|.|:|......|..|
 Frog   587 NSNGSSPRLSPQYSQSIHVKEEPAEDDVRPASLSAPTNQTTVLPED 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 32/87 (37%)
foxp4NP_001070655.1 FOXP-CC 278..345 CDD:374402 14/68 (21%)
COG5025 <436..641 CDD:227358 66/246 (27%)
FH 440..512 CDD:238016 30/78 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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