DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxe3

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001073150.2 Gene:foxe3 / 570855 ZFINID:ZDB-GENE-061214-6 Length:422 Species:Danio rerio


Alignment Length:409 Identity:112/409 - (27%)
Similarity:178/409 - (43%) Gaps:78/409 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 QHSPGGGYMSRISTSPSQVISNAHGMP--VLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSA 282
            ||||... .|.:..||:..:.:...:|  .||:.:.:..........:.|.|:.:..|       
Zfish    20 QHSPAEA-ASPVVVSPNVSLDSPVPLPPLALNHQARTKDGILIKAEPQGSSPNTDREE------- 76

  Fly   283 VVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEF 347
             |.:.|.:::..|:|....:|...:| .||..|||.:|..||..||..||||..||.::.:.:.|
Zfish    77 -VVSLGQTEEHLPATGSRRRKRPVQR-GKPPYSYIALIAMAIANSPERKLTLGGIYKFIMERFPF 139

  Fly   348 FRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRS 412
            :|.....|:||:||||:||:||.|:|:  ..|:||||||||:|..:..:|::...||||.|..|:
Zfish   140 YRENSKKWQNSIRHNLTLNDCFVKIPR--EPGRPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRT 202

  Fly   413 KIKVKP---------------YAGHANGYY---ASGYGD--AGMDNGNYYASPAFASYDYSAAGA 457
            .:...|               ...:.|..|   .||||.  ||..:      ||...:..::||.
Zfish   203 DVSTYPGYMQSSSAFTPTPMGRQAYPNTLYPGVTSGYGSQLAGSPH------PAMLHHYQASAGV 261

  Fly   458 TGVSPAGGQGFADPWNAH-------AAHSGS--SSVGVGMGVGPLPQYTNISCLAAGGNVNGSAT 513
            |       ||.|..::..       ...||.  ::..:|:|.|.|...|: ||        ..:|
Zfish   262 T-------QGQARMFSIDNIISQQTVMQSGGDLNTQSLGLGAGDLGTMTS-SC--------SVST 310

  Fly   514 TPPLAHSALGMAPSASSSSSPLGA-AATLQSDY---APTASLVAAGYSYATSAGSLDNGLR---- 570
            :.|.......:.|:::..|...|: |:.:.|.|   :||:....:|   .|.:|....|.:    
Zfish   311 SDPTCFQTQAINPTSNMLSRNTGSLASNMTSSYTYPSPTSPSHLSG---VTQSGFSPGGSQVYCS 372

  Fly   571 --SISLQQLPGLSSIQHAQ 587
              .|||..:...|...|.:
Zfish   373 GNRISLPPVRSGSCADHTE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 42/87 (48%)
foxe3NP_001073150.2 FH 103..191 CDD:214627 42/89 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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