DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxe1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_005159967.1 Gene:foxe1 / 567676 ZFINID:ZDB-GENE-061116-1 Length:354 Species:Danio rerio


Alignment Length:430 Identity:118/430 - (27%)
Similarity:166/430 - (38%) Gaps:141/430 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 MPVLNYSSSS-SSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRR 308
            |||:...|.| |.....:|.|:.:.|.:                                 |.||
Zfish     1 MPVVKVESDSPSETTLPVNDSQRAEPQR---------------------------------GRRR 32

  Fly   309 PE-----KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNEC 368
            ..     ||..|||.:|..||..||..||||..||.::.:.:.|:|.....|:||:||||:||:|
Zfish    33 KRPLQRGKPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNLTLNDC 97

  Fly   369 FKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPR-------GYRSKIKVKPY------- 419
            |.|:|:  ..|:|||||||.:|.|:..:||....||||.|       .|.|.:...|.       
Zfish    98 FIKIPR--EPGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDFTTYSSYVHESPVFSPVQIA 160

  Fly   420 -AGHANGYYASGYGDAGMDNGNYYASPAFAS------YDYSA----AGATGV--------SPAG- 464
             :.:||..|:           |...||.:|.      |..|:    ||.:.|        ||:. 
Zfish   161 RSAYANSVYS-----------NMAVSPPYAQQLPSAYYQSSSPNFTAGQSRVFRINSLIGSPSRM 214

  Fly   465 GQGFADPWNAH----------AAHSGSSSVGVGMGVGPLPQY------TNISCLAAGGNVNGSAT 513
            ||      ||.          :..|||.|:|     ||..|:      |.:||.::..|....|.
Zfish   215 GQ------NAEMIPQQSCRSFSPESGSCSLG-----GPGFQHQSCNGETVLSCYSSSSNNMAFAY 268

  Fly   514 TPPLAHSALGMA-PSASSSS-SPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQ 576
            :.| .|....:: |.||:.. .|.|..|.  |..:|.|. .|.|..|..:           |..|
Zfish   269 SGP-GHGQTQVSYPQASTQHYGPAGRMAI--SSLSPIAG-DAVGDPYGRT-----------SPAQ 318

  Fly   577 LPGLSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSM 616
            |.......::.|...:.|       :..||::|    |:|
Zfish   319 LGSFVQYNNSGAVGSSGA-------YIRHPAYS----GNM 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 42/87 (48%)
foxe1XP_005159967.1 FH 40..128 CDD:214627 43/89 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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