DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxf1

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001073655.1 Gene:foxf1 / 566407 ZFINID:ZDB-GENE-050419-153 Length:380 Species:Danio rerio


Alignment Length:473 Identity:162/473 - (34%)
Similarity:210/473 - (44%) Gaps:129/473 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 QQPQ-QLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSS-PAKSLNGSESSPPSQ 271
            |||. |.||    ||      |.::..|.|.       ||:..|||||| .||..|         
Zfish     6 QQPSVQTPA----HS------SPMTEKPVQT-------PVMETSSSSSSTKAKKTN--------- 44

  Fly   272 NHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSE 336
                                            :|.||||||..|||.:|..||:.|||.:|||||
Zfish    45 --------------------------------AGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSE 77

  Fly   337 IYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEG 401
            ||.:||..:.||||.|.||||||||||||||||.|||||:  |:||||:|||||..|..:|| ||
Zfish    78 IYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGL--GRPGKGHYWTIDPASEFMFE-EG 139

  Fly   402 SLRRRPRGYRSKIK-VKPYAGHANGYYASGYGDAGMDNG---NYYASPAFASYDYSAAGATGVSP 462
            |.||||||:|.|.: :||          |.|   .|.||   |:...    ||::.         
Zfish   140 SFRRRPRGFRRKCQALKP----------SMY---SMMNGLGFNHIPE----SYNFQ--------- 178

  Fly   463 AGGQGFADPWNAHAAHSG---------SSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLA 518
            .||.|.:.|.|:.:..||         |:..|:|:....:|..:..|..:..|:..||:.|.   
Zfish   179 GGGGGLSCPPNSLSLESGIGMMNGHLASNMEGMGLAGHSMPHLSTNSGHSYMGSCTGSSGTE--- 240

  Fly   519 HSALGMAPSASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQL----PG 579
                  .|...||:|||..:..:...:|..:|..:|..|...:  ||:||...|..|.|    ||
Zfish   241 ------YPHHDSSASPLLTSGGVMDPHAVYSSTASAWPSAPPT--SLNNGTSYIKQQPLSPCNPG 297

  Fly   580 LSSIQHA---QAQAQAQAHHHHH---------QHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQS 632
            .||:|.:   .:..|:..|.:.|         ::|...||...:.......|..|||:...|..|
Zfish   298 ASSLQPSLPTHSLEQSYLHQNGHGTTDLQGIPRYHTQSPSMCDRKEFVFSFNAMTSSSMHSPGSS 362

  Fly   633 GGSHGIDHSPIDRKPAYL 650
            ...|....|..|.||..:
Zfish   363 SYYHHQQVSYQDIKPCVM 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 58/87 (67%)
foxf1NP_001073655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 23/100 (23%)
FH 52..140 CDD:214627 60/90 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5529
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 199 1.000 Inparanoid score I3759
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25184
orthoMCL 1 0.900 - - OOG6_108542
Panther 1 1.100 - - O PTHR46262
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5614
SonicParanoid 1 1.000 - - X1971
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.890

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