DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxq2

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001098411.3 Gene:foxq2 / 565796 ZFINID:ZDB-GENE-050208-663 Length:244 Species:Danio rerio


Alignment Length:192 Identity:64/192 - (33%)
Similarity:90/192 - (46%) Gaps:28/192 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 SSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDT----------TKKSG 305
            |:..:.|..::|.||....:.|..|.|.          .|:||:..:.:.          .|..|
Zfish    29 STGRAEPEDNVNPSEDLQGTVNEPEQKT----------LSEQDSEKSEEQENDEDHENTHVKSEG 83

  Fly   306 TRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFK 370
            |  .||||.|||.:|..||.:|...||.|.:||.::...|.:|:.....|:|||||||||||||.
Zfish    84 T--DEKPAQSYIALISMAILDSDEKKLLLCDIYQWIMDHYPYFKSKDKNWRNSVRHNLSLNECFI 146

  Fly   371 KLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVK-PYAGHANGYYASGY 431
            |    .|....|||::|.|...:...|.:....|||.|....::..: |||..|: |...|:
Zfish   147 K----AGRSDNGKGHFWAIHPANFQDFSNGDYHRRRARRRIRRVTGQLPYALPAH-YQTLGH 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 37/78 (47%)
foxq2NP_001098411.3 None

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