DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin and foxn2b

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001017555.2 Gene:foxn2b / 550127 ZFINID:ZDB-GENE-050417-1 Length:396 Species:Danio rerio


Alignment Length:180 Identity:55/180 - (30%)
Similarity:87/180 - (48%) Gaps:12/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LPAQQLQHSPGGGYMSRISTSPSQVISNAHG--MPVLNYSSSSSSPAKSLNGSESSPPSQNHLEN 276
            ||..:...||....:.:|..|.|.|...:..  :..||:...:.....||.|.|:.|.:....: 
Zfish    35 LPEAESASSPMATSLDQIGRSVSVVAGESEDDELTNLNWLHENLLQNFSLGGPEAQPINSPLFD- 98

  Fly   277 KVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRP--EKPALSYINMIGHAIKESPTGKLTLSEIYA 339
                  :.|..||...:..|:..:......|.|  .||..|:..:|..||::||:..|.:.:||.
Zfish    99 ------IEGGIGSPHSNTNSSASSVSTGSERDPYKSKPPFSFSLLIYMAIEQSPSKSLPVKDIYG 157

  Fly   340 YLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTI 389
            ::.|.:.:|.....|||||||||||||:||:|:.:.:|... |||:.|.:
Zfish   158 WILKHFPYFSSAPTGWKNSVRHNLSLNKCFRKVERSIGKTN-GKGSLWCV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 33/78 (42%)
foxn2bNP_001017555.2 FH_FOX 128..209 CDD:469596 34/80 (43%)

Return to query results.
Submit another query.