DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxn3

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001016300.2 Gene:foxn3 / 549054 XenbaseID:XB-GENE-483117 Length:486 Species:Xenopus tropicalis


Alignment Length:187 Identity:32/187 - (17%)
Similarity:59/187 - (31%) Gaps:49/187 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 IFTHITRSGPEDW-----LNKHADFSKVFLAGDSAGANIAHHMAIRVDKEKLPPENFKISGMILF 194
            :..|..|...|.|     |::.|......:|.|..|...:...|......:|.|.:|        
 Frog    36 LLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSF-------- 92

  Fly   195 HPYFLSKALIEEMEVEAMRYYERLWRIASPDSGNGVEDPWINVVGSDLTGLG-----C------- 247
                 ..|:::.:|:...       .:.||........|::...||.|.|..     |       
 Frog    93 -----LAAVVDALELGPP-------VVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAA 145

  Fly   248 ------RRVLVMVAGNDVLARGGWSYVAELEKSGWIGKVKVMETKEEGHVFHLRDPD 298
                  ...|::....|.:.:..:.::.:|...      :|:..|..||..:|..|:
 Frog   146 NYASVKTPALIVYGDQDPMGQTSFEHLKQLPNH------RVLIMKGAGHPCYLDKPE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596
foxn3NP_001016300.2 FH_FOXN3 113..202 CDD:410833 15/90 (17%)
Blue background indicates that the domain is not in the aligned region.

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