DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and Foxi3

DIOPT Version :9

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001102819.1 Gene:Foxi3 / 502846 RGDID:1561816 Length:400 Species:Rattus norvegicus


Alignment Length:531 Identity:122/531 - (22%)
Similarity:177/531 - (33%) Gaps:210/531 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 YCSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVIS-----NAHG 244
            ||.:|.:.|          :.|....|...|..:   :|.|  :|..:..|:...:     |..|
  Rat     4 YCGDNFVYS----------QPAAAAAPGAPPTSR---APYG--LSDYAAPPAAAANPYLWLNGPG 53

  Fly   245 M----PVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQD-------APSTP 298
            :    ....|..:...|..:..|:...||            |..||...:|:.       ||::|
  Rat    54 VGGPASAAGYLGAPPPPPGAAPGAFLQPP------------AAPGTFAGAQRGFTQPSAAAPASP 106

  Fly   299 DTTKKSGTRRP-----------------EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYE 346
                 :|:..|                 .:|..||..:|..||:.:|..|||||.||.::..::.
  Rat   107 -----AGSAAPGELGWLSMASREDLMKMVRPPYSYSALIAMAIQSAPERKLTLSHIYQFVADNFP 166

  Fly   347 FFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYR 411
            |::....||:||:|||||||:||||:|:  ....||||||||:|.|...:| |.|:.||:.|   
  Rat   167 FYQRSKAGWQNSIRHNLSLNDCFKKVPR--DEDDPGKGNYWTLDPNCEKMF-DNGNFRRKRR--- 225

  Fly   412 SKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHA 476
                                            ..|.||.:.:.  .:|.|.:.||.         
  Rat   226 --------------------------------RRAEASSNLTV--PSGTSKSDGQS--------- 247

  Fly   477 AHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATL 541
                                   |.|...|.:.|.        |...|...:.|...|.|..:|.
  Rat   248 -----------------------SRLRVSGKLEGD--------SPSSMLRPSQSPEPPEGTKSTA 281

  Fly   542 QSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQ-LPGLSSIQHAQAQAQAQAHHHHHQHHASH 605
            .|..|.|.:......::.:|..:|.....|:|.|: |||                          
  Rat   282 SSPGASTLTSTPCLNTFLSSFNTLSVNASSMSTQRTLPG-------------------------- 320

  Fly   606 PSHSHQGHGSMHQNHGT---SSTTPPPSQSGGSHGIDHSPID-----------RKPAYLPPISPP 656
             |..|.|        ||   ||||.|      |..|..|.:|           :..:|..|.|  
  Rat   321 -SRRHPG--------GTQLPSSTTFP------STSIPDSSLDSVQLSTVGGGSQLSSYYSPFS-- 368

  Fly   657 PMMVALNGGGG 667
                   ||.|
  Rat   369 -------GGSG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 Forkhead 311..399 CDD:278670 42/87 (48%)
Foxi3NP_001102819.1 Forkhead 131..217 CDD:278670 42/88 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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