DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and foxj1

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_012827170.1 Gene:foxj1 / 496834 XenbaseID:XB-GENE-853648 Length:512 Species:Xenopus tropicalis


Alignment Length:468 Identity:111/468 - (23%)
Similarity:162/468 - (34%) Gaps:164/468 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SAGSASPQSNSKTPTDLPQDLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDY 197
            ||.:|:..:.|:  |.||          |:|.:.|...|.|.|:||........:...|...:.:
 Frog    38 SAAAAAAAAASR--TFLP----------SSALLGPTVPQEQFLDHQALLMFDLPTVAPIDMEDSW 90

  Fly   198 QLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQV-ISNAHGMPVLNY------SSSSS 255
            ....::.:.||.                .:.|.::...|.. :.......:||.      ||..|
 Frog    91 VTFQAEGEQGQD----------------SFSSSVNLDDSLTSLQWLQEFSILNANVGKAPSSGDS 139

  Fly   256 SPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPE---------- 310
            ...|.|:|:..||        ..:..|.:|        .|.||.....|.|.|..          
 Frog   140 HGYKHLSGAPCSP--------LAADPACLG--------MPHTPGKPISSSTSRASHLGLQPMEDI 188

  Fly   311 --------KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNE 367
                    ||..||..:|..|::.|...|:|||.||.::..::.:||.....|:||:|||||||:
 Frog   189 DYKTNPHVKPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNK 253

  Fly   368 CFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYG 432
            ||.|:|:..  .:||||.:|.||...|.         |...|...|.::.|...|          
 Frog   254 CFIKVPREK--DEPGKGGFWKIDPQYAD---------RLMNGAMKKRRLPPVQIH---------- 297

  Fly   433 DAGMDNGNYYASPAFASYDYSAAG-ATGVSP-------------------AGGQGFADPWNAHAA 477
                        |||||...:|:| :...||                   .|.||    |||...
 Frog   298 ------------PAFASAQAAASGNSNRGSPWQLSVNSESHQLLKEFEEATGEQG----WNALGE 346

  Fly   478 HSGSSSVGVGMG---VGPLP------------------QYTNISCL-----------AAGGNVNG 510
            | |.:::..|..   ..|||                  :.|.:..|           ::...||.
 Frog   347 H-GWNAISDGKSHKRKQPLPKRMFKAPRLSSSPMLCQEEQTELGSLKGDFDWEVIFDSSMNGVNF 410

  Fly   511 SA-----TTPPLA 518
            ||     .||||:
 Frog   411 SAFEDLEVTPPLS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 34/78 (44%)
foxj1XP_012827170.1 FH_FOXJ1 197..275 CDD:410797 35/79 (44%)

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