DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and fd96Cb

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster


Alignment Length:329 Identity:84/329 - (25%)
Similarity:127/329 - (38%) Gaps:79/329 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 EKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPK 374
            :||..|||::...||..||...|.|||||.::...:.|:|.....|:||:|||||.|:||.|:|:
  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76

  Fly   375 GMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSK-----IKVKPYAGHANGYYASGYGDA 434
              .|.|.|||:|||:...:..:||: |||.||.:.:|.|     |.....|..||....:.|.|.
  Fly    77 --NVTKAGKGSYWTLHPMAFDMFEN-GSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDD 138

  Fly   435 GMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNI 499
            .:..                           ..||||    |.|.                  ::
  Fly   139 QLTQ---------------------------MAFADP----ARHG------------------HV 154

  Fly   500 SCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGS 564
            ...|:...::....|||:..:.:...|:....:..:.:.........|...||...|      ||
  Fly   155 LANASAAQMSPYKATPPILPTTVTQLPARPKRAFTIESLMAPDPASTPNEGLVPMEY------GS 213

  Fly   565 LDNGLRSISLQQLPGLSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPP 629
            .|    :::|::.|........:..||.|.:         .||..:.|   .:.|......|||.
  Fly   214 PD----AVALEKPPFNLPFNFNELAAQYQLY---------FPSFFYNG---QYGNIPCYQKTPPL 262

  Fly   630 SQSG 633
            ..:|
  Fly   263 FHNG 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 37/78 (47%)
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 45/100 (45%)

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