DRSC/TRiP Functional Genomics Resources

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Protein Alignment bin and FoxP

DIOPT Version :10

Sequence 1:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster


Alignment Length:400 Identity:91/400 - (22%)
Similarity:151/400 - (37%) Gaps:109/400 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SPTELIDEKPNIGYMELKHYMDATPTATPVSAAQHYSLSALHSMGTPPASSSPIPPYGV------ 127
            ||...|||                   :..:|.||.|...:|..|  ....:|:|..|.      
  Fly    70 SPASSIDE-------------------SSTAAQQHESNPHMHIQG--QHMMAPVPDLGFYNVPEF 113

  Fly   128 ------LMTAHSAGSASPQSNSKTPTDLPQDLQYASSSTSTAK-VQPL-----------QVQLQP 174
                  ||.:    .|.....||.......|..|.....:..| ..||           ::.|:.
  Fly   114 ISEQEKLMFS----DAERFLRSKDNEVCNNDFSYMHDEFAMRKYYHPLFAHGICRWPGCEMDLED 174

  Fly   175 LNHQYASTIKYCS-------NNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRIS 232
            :    .|.:|:.:       .:|..:....|:::..|...|::..:|.| .:.|.    |:|:..
  Fly   175 I----TSFVKHLNTEHGLDDRSTAQARVQMQVVSQLESHLQKERDRLQA-MMHHL----YLSKQL 230

  Fly   233 TSPSQV-----------------ISNAHGMPVLNYSSSSSSPAKSLNGSE-SSPPSQNHLEN--K 277
            .||:::                 ..|:.|.|:...:|.|......:|.:. .|...:||.:|  .
  Fly   231 LSPTKIDRKDVPGREGKFCRSPLTVNSIGRPIRQTNSPSPLNLPMVNSTNLCSIKKRNHDKNTFS 295

  Fly   278 VSGS---AVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYA 339
            ::|.   .:...|...||:.....:..|.:..|    |..:|.::|..||.:||..:|||:|||.
  Fly   296 INGGLPYMLERAGLDVQQEIHRNREFYKNADVR----PPFTYASLIRQAIIDSPDKQLTLNEIYN 356

  Fly   340 YLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENS----AHLFEDE 400
            :.|.::.:||.....|||::|.||||::||.:.....       |::|.:|:|.    .||    
  Fly   357 WFQNTFCYFRRNAATWKNAIRTNLSLHKCFVRYEDDF-------GSFWMVDDNEFVKRRHL---- 410

  Fly   401 GSLRRRPRGY 410
              .|.|||.|
  Fly   411 --SRGRPRKY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
binNP_523950.2 FH_FOX 312..391 CDD:469596 28/78 (36%)
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036 10/71 (14%)
FH_FOX 327..408 CDD:469596 31/91 (34%)

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